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    TRAF4 TNF receptor associated factor 4 [ Aphelocoma coerulescens (scrub jay) ]

    Gene ID: 138120489, updated on 3-Dec-2024

    Summary

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    Gene symbol
    TRAF4
    Gene description
    TNF receptor associated factor 4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aphelocoma coerulescens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Aphelocoma
    Orthologs
    human mouse all
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    Genomic context

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    See TRAF4 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_10 current UR_Acoe_1.0 (GCF_041296385.1) 19 NC_091032.1 (6809128..6814856)

    Chromosome 19 - NC_091032.1Genomic Context describing neighboring genes Neighboring gene TLC domain containing 1 Neighboring gene NIMA related kinase 8 Neighboring gene family with sequence similarity 222 member B Neighboring gene Era like 12S mitochondrial rRNA chaperone 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_091032.1 Chromosome 19 Reference UR_Acoe_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of NF-kappaB-inducing kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of JNK cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TNF receptor-associated factor 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_041296385.1-RS_2024_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UR_Acoe_1.0 Primary Assembly

    Genomic

    1. NC_091032.1 Reference UR_Acoe_1.0 Primary Assembly

      Range
      6809128..6814856
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_069033229.1 → XP_068889330.1  TNF receptor-associated factor 4

      UniProtKB/TrEMBL
      A0A7K7CEK0
    Nucleotide Protein
    Heading Accession and Version

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