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    add1 adducin 1 (alpha) [ Cebidichthys violaceus (monkeyface prickleback) ]

    Gene ID: 137868162, updated on 25-Sep-2024

    Summary

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    Gene symbol
    add1
    Gene description
    adducin 1 (alpha)
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cebidichthys violaceus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Cottioidei; Zoarcales; Stichaeidae; Xiphisterinae; Cebidichthys
    Orthologs
    human zebrafish all
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    Genomic context

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    See add1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_09 current fCebVio1.0.p (GCF_023349555.1) Unplaced Scaffold NW_027176985.1 (380396..404029)

    NW_027176985.1Genomic Context describing neighboring genes Neighboring gene SHC (Src homology 2 domain containing) transforming protein 3 Neighboring gene sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D Neighboring gene alpha-synuclein-like Neighboring gene NOP14 nucleolar protein homolog (yeast)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_027176985 Unplaced Scaffold Reference fCebVio1.0.p

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in barbed-end actin filament capping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of adherens junction organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of establishment of endothelial barrier IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in adherens junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic density IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-adducin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_023349555.1-RS_2024_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fCebVio1.0.p

    Genomic

    1. NW_027176985.1 Reference fCebVio1.0.p

      Range
      380396..404029
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068704730.1 → XP_068560831.1  alpha-adducin isoform X1

    2. XM_068704732.1 → XP_068560833.1  alpha-adducin isoform X3

    3. XM_068704731.1 → XP_068560832.1  alpha-adducin isoform X2

    4. XM_068704736.1 → XP_068560837.1  alpha-adducin isoform X6

    5. XM_068704738.1 → XP_068560839.1  alpha-adducin isoform X8

    6. XM_068704737.1 → XP_068560838.1  alpha-adducin isoform X7

    7. XM_068704741.1 → XP_068560842.1  alpha-adducin isoform X11

    8. XM_068704742.1 → XP_068560843.1  alpha-adducin isoform X12

    9. XM_068704743.1 → XP_068560844.1  alpha-adducin isoform X13

    10. XM_068704735.1 → XP_068560836.1  alpha-adducin isoform X5

    11. XM_068704739.1 → XP_068560840.1  alpha-adducin isoform X9

    12. XM_068704733.1 → XP_068560834.1  alpha-adducin isoform X4

    13. XM_068704740.1 → XP_068560841.1  alpha-adducin isoform X10

    Nucleotide Protein
    Heading Accession and Version

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