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    hnrnpa0.L heterogeneous nuclear ribonucleoprotein A0 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 398455, updated on 4-Jan-2025

    Summary

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    Official Symbol
    hnrnpa0.L
    Official Full Name
    heterogeneous nuclear ribonucleoprotein A0 L homeolog
    Primary source
    Xenbase:XB-GENE-1000580
    Locus tag
    XELAEV_18004598mg
    See related
    AllianceGenome:Xenbase:XB-GENE-1000580
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    hnrpa0; hnrnpa0
    Summary
    Predicted to enable RNA binding activity. Predicted to be part of ribonucleoprotein complex. Orthologous to human HNRNPA0 (heterogeneous nuclear ribonucleoprotein A0). [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

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    See hnrnpa0.L in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (37525568..37527094, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694880.1 (496757..498283, complement)

    Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene transcriptional activator protein Pur-alpha Neighboring gene heterogeneous nuclear ribonucleoprotein A/B L homeolog Neighboring gene uncharacterized LOC121401443 Neighboring gene uncharacterized LOC108705307

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC130809

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein A0 L homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001088945.1 → NP_001082414.1  heterogeneous nuclear ribonucleoprotein A0 L homeolog

      See identical proteins and their annotated locations for NP_001082414.1

      Status: PROVISIONAL

      Source sequence(s)
      BC106305
      UniProtKB/TrEMBL
      A0A8J0PSL9, A0A974GZS9, A0AA97PZ70, Q6DKN1, Q7ZYU2
      Conserved Domains (3) summary
      cd12326
      Location:10 → 88
      RRM1_hnRNPA0; RNA recognition motif 1 found in heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0) and similar proteins
      cd12579
      Location:104 → 183
      RRM2_hnRNPA0; RNA recognition motif 2 in heterogeneous nuclear ribonucleoprotein A0 (hnRNP A0) and similar proteins
      pfam11627
      Location:251 → 276
      HnRNPA1; Nuclear factor hnRNPA1

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      37525568..37527094 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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