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    BDBG_07681 protein FYV10 [ Blastomyces gilchristii SLH14081 ]

    Gene ID: 8508806, updated on 31-Oct-2024

    Summary

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    Gene symbol
    BDBG_07681
    Gene description
    protein FYV10
    Locus tag
    BDBG_07681
    See related
    FungiDB:BDBG_07681; VEuPathDB:BDBG_07681
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Blastomyces gilchristii SLH14081 (strain: SLH14081)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Blastomyces
    Orthologs
    Aspergillus fumigatus all
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    Genomic context

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    See BDBG_07681 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    4

    NW_003101663.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene centromere/microtubule-binding protein cbf5 Neighboring gene uncharacterized protein Neighboring gene GDP-mannose transporter 1 Neighboring gene Ser/Thr protein phosphatase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003101663.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GID complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein FYV10

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003101663.1 Reference assembly

      Range
      196098..198424
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002621796.2 → XP_002621842.1  protein FYV10 [Blastomyces gilchristii SLH14081]

      See identical proteins and their annotated locations for XP_002621842.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A179UZ50
      Conserved Domains (3) summary
      smart00668
      Location:169 → 218
      CTLH; C-terminal to LisH motif
      smart00757
      Location:221 → 311
      CRA; CT11-RanBPM
      pfam10607
      Location:164 → 306
      CLTH; CTLH/CRA C-terminal to LisH motif domain
    Nucleotide Protein
    Heading Accession and Version

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