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    LOC8263899 probable galacturonosyltransferase 9 [ Ricinus communis (castor bean) ]

    Gene ID: 8263899, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8263899
    Gene description
    probable galacturonosyltransferase 9
    Locus tag
    RCOM_0876620
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8263899 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 5 NC_063260.1 (10417099..10419907)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994737.1 (51926..54716)

    Chromosome 5 - NC_063260.1Genomic Context describing neighboring genes Neighboring gene basic leucine zipper 43 Neighboring gene uncharacterized LOC107262178 Neighboring gene 6-phosphogluconate dehydrogenase, decarboxylating 2 Neighboring gene protein SOB FIVE-LIKE 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable galacturonosyltransferase 9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063260.1 Reference ASM1957865v1

      Range
      10417099..10419907
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002530756.4 → XP_002530802.1  probable galacturonosyltransferase 9

      See identical proteins and their annotated locations for XP_002530802.1

      UniProtKB/TrEMBL
      B9SXT3
      Conserved Domains (2) summary
      cd06429
      Location:252 → 550
      GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
      PLN02523
      Location:17 → 563
      PLN02523; galacturonosyltransferase
    Nucleotide Protein
    Heading Accession and Version

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