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    LOC8287204 sister-chromatid cohesion protein 3 [ Ricinus communis (castor bean) ]

    Gene ID: 8287204, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8287204
    Gene description
    sister-chromatid cohesion protein 3
    Locus tag
    RCOM_0557120
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8287204 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 1 NC_063256.1 (7129786..7138220, complement)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994367.1 (366395..374903)

    Chromosome 1 - NC_063256.1Genomic Context describing neighboring genes Neighboring gene nodulin homeobox Neighboring gene cytochrome c oxidase subunit 5C Neighboring gene uncharacterized LOC125370853 Neighboring gene NPL4-like protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sister chromatid cohesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cohesin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sister-chromatid cohesion protein 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063256.1 Reference ASM1957865v1

      Range
      7129786..7138220 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_048377856.1 → XP_048233813.1  sister-chromatid cohesion protein 3 isoform X1

    2. XM_002520660.4 → XP_002520706.1  sister-chromatid cohesion protein 3 isoform X2

      See identical proteins and their annotated locations for XP_002520706.1

      UniProtKB/TrEMBL
      B9S3Y7
      Conserved Domains (2) summary
      cd01671
      Location:860 → 903
      CARD; Caspase activation and recruitment domain: a protein-protein interaction domain
      pfam08514
      Location:143 → 248
      STAG; STAG domain
    Nucleotide Protein
    Heading Accession and Version

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