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    LOC8278000 BTB/POZ domain-containing protein At1g21780 [ Ricinus communis (castor bean) ]

    Gene ID: 8278000, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8278000
    Gene description
    BTB/POZ domain-containing protein At1g21780
    Locus tag
    RCOM_1030620
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8278000 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 2 NC_063257.1 (7074963..7077866, complement)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994287.1 (75421..78359)

    Chromosome 2 - NC_063257.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase ATL4-like Neighboring gene protein transport protein Sec24-like At4g32640 Neighboring gene V-type proton ATPase subunit c4 Neighboring gene uncharacterized LOC125369158 Neighboring gene acetyltransferase At1g77540

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein At1g21780

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063257.1 Reference ASM1957865v1

      Range
      7074963..7077866 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002513706.4 → XP_002513752.1  BTB/POZ domain-containing protein At1g21780

      See identical proteins and their annotated locations for XP_002513752.1

      UniProtKB/TrEMBL
      B9RJ33
      Conserved Domains (2) summary
      smart00225
      Location:162 → 259
      BTB; Broad-Complex, Tramtrack and Bric a brac
      pfam00651
      Location:151 → 256
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version

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