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    MICPUN_56945 pyruvate kinase [ Micromonas commoda ]

    Gene ID: 8241711, updated on 16-Nov-2023

    Summary

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    Gene symbol
    MICPUN_56945
    Gene description
    pyruvate kinase
    Locus tag
    MICPUN_56945
    Gene type
    protein coding
    RNA name
    pyruvate kinase
    RefSeq status
    PROVISIONAL
    Organism
    Micromonas commoda (strain: RCC299)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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    Genomic context

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    See MICPUN_56945 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_013040.1 (706251..708724, complement)

    Chromosome 3 - NC_013040.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013040.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables potassium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyruvate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycolytic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    pyruvate kinase
    XP_002500945.1
    • putative pyruvate kinase. ChloroP predicts a 17 aa transit peptide, but with a low score. Reaction: ATP + pyruvate = ADP + phosphoenolpyruvate

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013040.1 Reference assembly

      Range
      706251..708724 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002500899.1 → XP_002500945.1  pyruvate kinase [Micromonas commoda]

      See identical proteins and their annotated locations for XP_002500945.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C1E1P5
      Conserved Domains (2) summary
      PLN02461
      Location:29 → 539
      PLN02461; Probable pyruvate kinase
      cl23794
      Location:53 → 538
      Pyruvate_Kinase; Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors. Like other allosteric enzymes, PK has a high substrate affinity R state and a low ...
    Nucleotide Protein
    Heading Accession and Version

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