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    Ola1 Obg-like ATPase 1 [ Mus musculus (house mouse) ]

    Gene ID: 67059, updated on 27-Nov-2024

    Summary

    Official Symbol
    Ola1provided by MGI
    Official Full Name
    Obg-like ATPase 1provided by MGI
    Primary source
    MGI:MGI:1914309
    See related
    Ensembl:ENSMUSG00000027108 AllianceGenome:MGI:1914309
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gtpbp9; PTD004; 2510025G09Rik; 2810405J23Rik; 2810409H07Rik
    Summary
    Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in ATP metabolic process. Predicted to be located in centrosome and cytosol. Predicted to be active in cytoplasm. Orthologous to human OLA1 (Obg like ATPase 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in CNS E11.5 (RPKM 15.1), liver E14 (RPKM 14.7) and 22 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Ola1 in Genome Data Viewer
    Location:
    2 C3; 2 43.35 cM
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (72923145..73044791, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (73092801..73214447, complement)

    Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_04828 Neighboring gene trans-acting transcription factor 3 Neighboring gene STARR-seq mESC enhancer starr_04829 Neighboring gene STARR-positive B cell enhancer mm9_chr2:72835176-72835477 Neighboring gene STARR-positive B cell enhancer mm9_chr2:72841087-72841388 Neighboring gene trans-acting transcription factor 3, opposite strand Neighboring gene STARR-seq mESC enhancer starr_04832 Neighboring gene predicted gene, 39850 Neighboring gene STARR-positive B cell enhancer mm9_chr2:72878181-72878481 Neighboring gene STARR-seq mESC enhancer starr_04835 Neighboring gene STARR-seq mESC enhancer starr_04836 Neighboring gene ribosomal protein L17 pseudogene Neighboring gene ribosomal protein L7A pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E2622 Neighboring gene trans-acting transcription factor 9 Neighboring gene corepressor interacting with RBPJ, 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Gene trapped (1) 
    • Targeted (4)  1 citation

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables ATP hydrolysis activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP hydrolysis activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ribosomal large subunit binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in ATP metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in ATP metabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytosol ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    obg-like ATPase 1
    Names
    GTP-binding protein 9 (putative)
    GTP-binding protein PTD004
    NP_080218.1
    NP_084367.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_025942.2NP_080218.1  obg-like ATPase 1 isoform a

      See identical proteins and their annotated locations for NP_080218.1

      Status: VALIDATED

      Source sequence(s)
      AK010817, AK013055, BX521012
      Consensus CDS
      CCDS16124.1
      UniProtKB/Swiss-Prot
      B1AYJ8, B1AYK0, Q9CWE2, Q9CX91, Q9CYC9, Q9CZ30, Q9CZ56
      UniProtKB/TrEMBL
      Q3TJF2
      Related
      ENSMUSP00000028517.7, ENSMUST00000028517.13
      Conserved Domains (1) summary
      PTZ00258
      Location:1390
      PTZ00258; GTP-binding protein; Provisional
    2. NM_030091.1NP_084367.1  obg-like ATPase 1 isoform b

      Status: VALIDATED

      Source sequence(s)
      AK013055, BG069761
      Consensus CDS
      CCDS16125.1
      UniProtKB/TrEMBL
      B1AYJ9
      Related
      ENSMUSP00000097592.5, ENSMUST00000100015.6
      Conserved Domains (1) summary
      cd01900
      Location:25242
      YchF; YchF GTPase

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000068.8 Reference GRCm39 C57BL/6J

      Range
      72923145..73044791 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)