AGT3 alanine:glyoxylate aminotransferase 3 [Arabidopsis thaliana (thale cress)] - Gene

Summary

Go to the top of the page Help

Official Symbol: AGT3
Official Full Name: alanine:glyoxylate aminotransferase 3
Primary source: TAIR:AT2G38400
Locus tag: AT2G38400
See related: Araport:AT2G38400
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ALANINE:GLYOXYLATE AMINOTRANSFERASE 2 HOMOLOG; alanine:glyoxylate aminotransferase 3; T19C21.11; T19C21_11
Summary: alanine:glyoxylate aminotransferase 2 homolog (AGT3) mRNA
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help

See AGT3 in Genome Data Viewer

Location:: chromosome: 2

Exon count:: 7

Sequence:: Chromosome: 2; NC_003071.7 (16083645..16086453)

Chromosome 2 - NC_003071.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

Pathways from PubChem

Go to the top of the page

Interactions

Go to the top of the page Help

Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

Go to the top of the page Help

Homology

Orthologs from OrthoDB

NM_001202772.1

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables alanine-glyoxylate transaminase activity	IEA Inferred from Electronic Annotation more info
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed
enables pyridoxal phosphate binding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in chloroplast	ISM Inferred from Sequence Model more info

General protein information

Go to the top of the page Help

Preferred Names: alanine:glyoxylate aminotransferase 3

NP_001189701.1

alanine:glyoxylate aminotransferase 3 (AGT3); FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, alanine-glyoxylate transaminase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: PYRIMIDINE 4 (TAIR:AT3G08860.1).

NP_181374.1

alanine:glyoxylate aminotransferase 3 (AGT3); FUNCTIONS IN: pyridoxal phosphate binding, transaminase activity, catalytic activity, alanine-glyoxylate transaminase activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferase class-III (InterPro:IPR005814), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: PYRIMIDINE 4 (TAIR:AT3G08860.1); Has 36057 Blast hits to 36036 proteins in 2736 species: Archae - 736; Bacteria - 23005; Metazoa - 660; Fungi - 839; Plants - 398; Viruses - 17; Other Eukaryotes - 10402 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003071.7 Reference assembly

Range

16083645..16086453

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_129396.4 → NP_181374.1 alanine:glyoxylate aminotransferase 3 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_181374.1

Status: REVIEWED

UniProtKB/Swiss-Prot

O80911, Q94AL9

UniProtKB/TrEMBL

A0A178W3Q4, A0A5S9X570, A0A7G2EFD7

Conserved Domains (1) summary

COG0160
Location:54 → 471

GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]
NM_001202772.1 → NP_001189701.1 alanine:glyoxylate aminotransferase 3 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001189701.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A7G2EFD7, F4ISY3

Conserved Domains (3) summary

cd00610
Location:62 → 463

OAT_like; Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, ...

COG0160
Location:54 → 463

GabT; 4-aminobutyrate aminotransferase or related aminotransferase [Amino acid transport and metabolism]

cl01970
Location:435 → 493

DUF2155; Uncharacterized protein conserved in bacteria (DUF2155)