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    Bcap29 B cell receptor associated protein 29 [ Mus musculus (house mouse) ]

    Gene ID: 12033, updated on 27-Nov-2024

    Summary

    Official Symbol
    Bcap29provided by MGI
    Official Full Name
    B cell receptor associated protein 29provided by MGI
    Primary source
    MGI:MGI:101917
    See related
    Ensembl:ENSMUSG00000020650 AllianceGenome:MGI:101917
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Bap29
    Summary
    Acts upstream of or within endoplasmic reticulum to Golgi vesicle-mediated transport and protein localization to endoplasmic reticulum exit site. Predicted to be active in endoplasmic reticulum membrane. Is expressed in several structures, including ganglia; gut; submandibular gland primordium; telencephalon ventricular layer; and vibrissa. Orthologous to human BCAP29 (B cell receptor associated protein 29). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Broad expression in testis adult (RPKM 21.6), cortex adult (RPKM 9.1) and 19 other tissues See more
    Orthologs
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    Genomic context

    See Bcap29 in Genome Data Viewer
    Location:
    12 A2- A3; 12 13.63 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (31645353..31684657, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (31595354..31634658, complement)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene Casitas B-lineage lymphoma-like 1 Neighboring gene predicted gene, 40362 Neighboring gene solute carrier family 26, member 4 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:32339618-32339801 Neighboring gene STARR-seq mESC enhancer starr_31859 Neighboring gene dihydrouridine synthase 4 like Neighboring gene component of oligomeric golgi complex 5 Neighboring gene G protein-coupled receptor 22

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    B-cell receptor-associated protein 29
    Names
    BCR-associated protein 29

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001164090.1NP_001157562.1  B-cell receptor-associated protein 29

      See identical proteins and their annotated locations for NP_001157562.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      AC119950
      Consensus CDS
      CCDS25864.1
      UniProtKB/Swiss-Prot
      Q61334
      UniProtKB/TrEMBL
      Q542A1
      Related
      ENSMUSP00000137260.2, ENSMUST00000177962.9
      Conserved Domains (1) summary
      pfam05529
      Location:1219
      Bap31; B-cell receptor-associated protein 31-like
    2. NM_007530.3NP_031556.1  B-cell receptor-associated protein 29

      See identical proteins and their annotated locations for NP_031556.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      AC119950
      Consensus CDS
      CCDS25864.1
      UniProtKB/Swiss-Prot
      Q61334
      UniProtKB/TrEMBL
      Q542A1
      Related
      ENSMUSP00000020979.8, ENSMUST00000020979.9
      Conserved Domains (1) summary
      pfam05529
      Location:1219
      Bap31; B-cell receptor-associated protein 31-like

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      31645353..31684657 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)