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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_051960.1 RefSeqGene
- Range
-
4999..29136
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001145975.2 → NP_001139447.1 solute carrier family 13 member 2 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
AC015917, AK298388, AK314684, AW024214, BC096277
- Consensus CDS
-
CCDS54098.1
- UniProtKB/TrEMBL
-
B4E1M6
- Related
- ENSP00000392411.3, ENST00000444914.7
- Conserved Domains (1) summary
-
- cl21473
Location:6 → 614
- ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...
-
NM_001346683.2 → NP_001333612.1 solute carrier family 13 member 2 isoform d
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) includes an alternate internal exon and uses an alternate in-frame splice junction compared to variant 1. The resulting isoform (d) is shorter at the N-terminus and lacks an alternate internal segment compared to isoform a.
- Source sequence(s)
-
AC015917
- Consensus CDS
-
CCDS92282.1
- UniProtKB/TrEMBL
- B4E1M6, J3QL78
- Related
- ENSP00000463421.2, ENST00000579281.5
-
NM_001346684.2 → NP_001333613.1 solute carrier family 13 member 2 isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) includes an alternate internal exon and lacks an alternate internal segment compared to variant 1. The resulting isoform (e) has a shorter and distinct N-terminus compared to isoform a.
- Source sequence(s)
-
AC015917
- UniProtKB/TrEMBL
-
B3KRN0
-
NM_003984.4 → NP_003975.1 solute carrier family 13 member 2 isoform b
See identical proteins and their annotated locations for NP_003975.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the internal coding region compared to variant 1. This results in a shorter isoform (b) compared to isoform a.
- Source sequence(s)
-
AC015917, AW024214, DB320886, U26209
- Consensus CDS
-
CCDS11231.1
- UniProtKB/Swiss-Prot
- B2RBI9, B4DPL1, E7ETH5, Q13183, Q4VAR7
- UniProtKB/TrEMBL
-
B4E1M6
- Related
- ENSP00000316202.6, ENST00000314669.10
- Conserved Domains (1) summary
-
- pfam00939
Location:6 → 565
- Na_sulph_symp; Sodium:sulfate symporter transmembrane region
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000017.11 Reference GRCh38.p14 Primary Assembly
- Range
-
28473644..28497781
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047437011.1 → XP_047292967.1 solute carrier family 13 member 2 isoform X2
- UniProtKB/TrEMBL
-
B4E1M6
-
XM_011525450.4 → XP_011523752.1 solute carrier family 13 member 2 isoform X1
- UniProtKB/TrEMBL
-
B4E1M6
- Conserved Domains (2) summary
-
- TIGR00785
Location:33 → 608
- dass; anion transporter
- cl21473
Location:6 → 615
- ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...
-
XM_011525453.3 → XP_011523755.1 solute carrier family 13 member 2 isoform X4
- UniProtKB/TrEMBL
-
B4E1M6
- Conserved Domains (2) summary
-
- TIGR00785
Location:33 → 535
- dass; anion transporter
- cl21473
Location:6 → 542
- ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...
-
XM_011525452.2 → XP_011523754.1 solute carrier family 13 member 2 isoform X3
- UniProtKB/TrEMBL
-
B4E1M6
- Conserved Domains (2) summary
-
- TIGR00785
Location:33 → 559
- dass; anion transporter
- pfam00939
Location:6 → 566
- Na_sulph_symp; Sodium:sulfate symporter transmembrane region
-
XM_011525454.4 → XP_011523756.1 solute carrier family 13 member 2 isoform X5
- Conserved Domains (1) summary
-
- cl21473
Location:6 → 396
- ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...
Alternate T2T-CHM13v2.0
Genomic
-
NC_060941.1 Alternate T2T-CHM13v2.0
- Range
-
29416661..29440798
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054317707.1 → XP_054173682.1 solute carrier family 13 member 2 isoform X2
- UniProtKB/TrEMBL
-
B4E1M6
-
XM_054317706.1 → XP_054173681.1 solute carrier family 13 member 2 isoform X1
- UniProtKB/TrEMBL
-
B4E1M6
-
XM_054317709.1 → XP_054173684.1 solute carrier family 13 member 2 isoform X4
- UniProtKB/TrEMBL
-
B4E1M6
-
XM_054317708.1 → XP_054173683.1 solute carrier family 13 member 2 isoform X3
- UniProtKB/TrEMBL
-
B4E1M6
-
XM_054317710.1 → XP_054173685.1 solute carrier family 13 member 2 isoform X5
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001145976.1: Suppressed sequence
- Description
- NM_001145976.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.