U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    UPTI plasmin trypsin inhibitor [ Sus scrofa (pig) ]

    Gene ID: 396887, updated on 16-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    UPTI
    Gene description
    plasmin trypsin inhibitor
    See related
    Ensembl:ENSSSCG00000035724
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Biased expression in kidney (RPKM 4.0), mixtures (RPKM 1.0) and 1 other tissue See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See UPTI in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 17 NC_010459.5 (47792171..47807770)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 17 NC_010459.4 (53374127..53383544, complement)

    Chromosome 17 - NC_010459.5Genomic Context describing neighboring genes Neighboring gene pancreatic trypsin inhibitor-like Neighboring gene pancreatic trypsin inhibitor Neighboring gene WAP four-disulfide core domain 2 Neighboring gene eppin-like Neighboring gene transfer RNA glutamic acid (anticodon UUC)

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Purification, characterization, and cDNA cloning of a Kunitz-type proteinase inhibitor secreted by the porcine uterus. Stallings-Mann ML, et al. J Biol Chem, 1994 Sep 30. PMID 7929061
    2. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uterine plasmin/trypsin inhibitor

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213871.2 → NP_999036.2  uterine plasmin/trypsin inhibitor precursor

      Status: VALIDATED

      Source sequence(s)
      BI401534, CK449383
      UniProtKB/TrEMBL
      A0A4X1TWT4, A0A8D0PJ63, A0A8D0SWF3, A0A8D1XYZ2, I3LQ76
      Conserved Domains (1) summary
      cd00109
      Location:36 → 88
      KU; BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010459.5 Reference Sscrofa11.1 Primary Assembly

      Range
      47792171..47807770
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021077963.1 → XP_020933622.1  uterine plasmin/trypsin inhibitor isoform X1

      Conserved Domains (1) summary
      cd00109
      Location:47 → 99
      KU; BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.

    2. XM_021077962.1 → XP_020933621.1  uterine plasmin/trypsin inhibitor isoform X1

      Conserved Domains (1) summary
      cd00109
      Location:47 → 99
      KU; BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.

    3. XM_021077965.1 → XP_020933624.1  uterine plasmin/trypsin inhibitor isoform X2

      UniProtKB/TrEMBL
      A0A4X1TWT4, A0A8D0PJ63, A0A8D0SWF3, A0A8D1XYZ2, I3LQ76
      Conserved Domains (1) summary
      cd00109
      Location:36 → 88
      KU; BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.

    4. XM_021077964.1 → XP_020933623.1  uterine plasmin/trypsin inhibitor isoform X2

      UniProtKB/TrEMBL
      A0A4X1TWT4, A0A8D0PJ63, A0A8D0SWF3, A0A8D1XYZ2, I3LQ76
      Conserved Domains (1) summary
      cd00109
      Location:36 → 88
      KU; BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.

    5. XM_021077966.1 → XP_020933625.1  uterine plasmin/trypsin inhibitor isoform X2

      UniProtKB/TrEMBL
      A0A4X1TWT4, A0A8D0PJ63, A0A8D0SWF3, A0A8D1XYZ2, I3LQ76
      Related
      ENSSSCP00000026254.3, ENSSSCT00000025064.4
      Conserved Domains (1) summary
      cd00109
      Location:36 → 88
      KU; BPTI/Kunitz family of serine protease inhibitors; Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure.
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q29100.1 GenPept UniProtKB/Swiss-Prot:Q29100

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials