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    PDCD2 programmed cell death 2 [ Gorilla gorilla gorilla (western lowland gorilla) ]

    Gene ID: 101126184, updated on 3-Dec-2024

    Summary

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    Gene symbol
    PDCD2
    Gene description
    programmed cell death 2
    See related
    Ensembl:ENSGGOG00000028229
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gorilla gorilla gorilla (sub-species: gorilla)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Gorilla
    Orthologs
    human mouse all
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    Genomic context

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    See PDCD2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mGorGor1-v2.0_pri (GCF_029281585.2) 5 NC_073229.2 (194843969..194854125, complement)
    RS_2023_04 previous assembly NHGRI_mGorGor1-v1.1-0.2.freeze_pri (GCF_029281585.1) 6 NC_073230.1 (194652592..194660168, complement)

    Chromosome 5 - NC_073229.2Genomic Context describing neighboring genes Neighboring gene proteasome 20S subunit beta 1 Neighboring gene TATA-box binding protein Neighboring gene uncharacterized LOC109027124 Neighboring gene uncharacterized LOC134758710

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    programmed cell death protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_029281585.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

    Genomic

    1. NC_073229.2 Reference NHGRI_mGorGor1-v2.0_pri Primary Assembly

      Range
      194843969..194854125 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004044989.5 → XP_004045037.2  programmed cell death protein 2 isoform X1

      UniProtKB/TrEMBL
      A0A2I2Z9S4

    2. XM_004044990.5 → XP_004045038.2  programmed cell death protein 2 isoform X2

      UniProtKB/TrEMBL
      G3S9B4

    3. XM_063708017.1 → XP_063564087.1  programmed cell death protein 2 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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