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    LOC102990065 60S acidic ribosomal protein P1-like [ Physeter macrocephalus (sperm whale) ]

    Gene ID: 102990065, updated on 30-Nov-2024

    Summary

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    Gene symbol
    LOC102990065
    Gene description
    60S acidic ribosomal protein P1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Physeter macrocephalus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
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    Genomic context

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    See LOC102990065 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_04 current ASM283717v5 (GCF_002837175.3) 9 NC_041222.1 (100494750..100505822)
    102 previous assembly ASM283717v2 (GCF_002837175.2) 9 NC_041222.1 (100505406..100505895)

    Chromosome 9 - NC_041222.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102982029 Neighboring gene XK related 6 Neighboring gene U6 spliceosomal RNA Neighboring gene myotubularin related protein 9 Neighboring gene uncharacterized LOC129392429 Neighboring gene L-threonine 3-dehydrogenase, mitochondrial

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein kinase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribonucleoprotein complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translational elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    60S acidic ribosomal protein P1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM283717v5 Primary Assembly

    Genomic

    1. NC_041222.1 Reference ASM283717v5 Primary Assembly

      Range
      100494750..100505822
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_055087368.1 → XP_054943343.1  60S acidic ribosomal protein P1-like

      UniProtKB/TrEMBL
      A0A9W2WW15
    Nucleotide Protein
    Heading Accession and Version

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