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    LOC106880821 damage-control phosphatase ARMT1 [ Octopus bimaculoides (California two-spot octopus) ]

    Gene ID: 106880821, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC106880821
    Gene description
    damage-control phosphatase ARMT1
    Locus tag
    OCBIM_22006492mg
    See related
    EnsemblRapid:LOC106880821
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Octopus bimaculoides
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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    Genomic context

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    See LOC106880821 in Genome Data Viewer
    Location:
    chromosome: 30
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_01 current ASM119413v2 (GCF_001194135.2) 30 NC_069010.1 (3135914..3382695)
    100 previous assembly Octopus_bimaculoides_v2_0 (GCF_001194135.1) Unplaced Scaffold NW_014712044.1 (11563..17191)

    Chromosome 30 - NC_069010.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128251304 Neighboring gene uncharacterized LOC106874340 Neighboring gene sodium-dependent dopamine transporter Neighboring gene zinc finger protein 227-like Neighboring gene deubiquitinase OTUD6B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    damage-control phosphatase ARMT1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_001194135.2-RS_

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM119413v2 Primary Assembly

    Genomic

    1. NC_069010.1 Reference ASM119413v2 Primary Assembly

      Range
      3135914..3382695
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_052978191.1 → XP_052834151.1  damage-control phosphatase ARMT1

      UniProtKB/TrEMBL
      A0A0L8FVR9
      Related
      XP_052834151.1, XM_052978191.1

    2. XM_014930948.2 → XP_014786434.1  damage-control phosphatase ARMT1

      UniProtKB/TrEMBL
      A0A0L8FVR9
      Related
      XP_014786434.1, XM_014930948.2
      Conserved Domains (1) summary
      pfam01937
      Location:24 → 427
      DUF89; Protein of unknown function DUF89
    Nucleotide Protein
    Heading Accession and Version

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