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    LOC106882805 nodal homolog [ Octopus bimaculoides (California two-spot octopus) ]

    Gene ID: 106882805, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC106882805
    Gene description
    nodal homolog
    Locus tag
    OCBIM_22016509mg
    See related
    EnsemblRapid:LOC106882805
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Octopus bimaculoides
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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    Genomic context

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    See LOC106882805 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_01 current ASM119413v2 (GCF_001194135.2) 4 NC_068984.1 (23557154..23565797)
    100 previous assembly Octopus_bimaculoides_v2_0 (GCF_001194135.1) Unplaced Scaffold NW_014752432.1 (90722..94468, complement)

    Chromosome 4 - NC_068984.1Genomic Context describing neighboring genes Neighboring gene chitobiosyldiphosphodolichol beta-mannosyltransferase Neighboring gene uncharacterized LOC106882809 Neighboring gene charged multivesicular body protein 6-A Neighboring gene uncharacterized LOC106882807 Neighboring gene nucleosome-remodeling factor subunit BPTF

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables type I activin receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in SMAD protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nodal homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_001194135.2-RS_

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM119413v2 Primary Assembly

    Genomic

    1. NC_068984.1 Reference ASM119413v2 Primary Assembly

      Range
      23557154..23565797
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014933587.2 → XP_014789073.2  nodal homolog

      UniProtKB/TrEMBL
      A0A0L8FK69
      Related
      XP_014789073.2, XM_014933587.2
    Nucleotide Protein
    Heading Accession and Version

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