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    LOC8071457 probable galacturonosyltransferase 7 [ Sorghum bicolor (sorghum) ]

    Gene ID: 8071457, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC8071457
    Gene description
    probable galacturonosyltransferase 7
    Locus tag
    SORBI_3008G022500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sorghum bicolor
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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    Genomic context

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    See LOC8071457 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 8 NC_012877.2 (1978483..1983964)

    Chromosome 8 - NC_012877.2Genomic Context describing neighboring genes Neighboring gene wall-associated receptor kinase 4 Neighboring gene pentatricopeptide repeat-containing protein At4g18975, chloroplastic Neighboring gene calcium uniporter protein 6, mitochondrial Neighboring gene putative pentatricopeptide repeat-containing protein At2g02150

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012877.2 Chromosome 8 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable galacturonosyltransferase 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Genomic

    1. NC_012877.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

      Range
      1978483..1983964
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002441718.2 → XP_002441763.1  probable galacturonosyltransferase 7 isoform X1

      See identical proteins and their annotated locations for XP_002441763.1

      UniProtKB/TrEMBL
      A0A921QDS7, C5YR34
      Conserved Domains (2) summary
      cd06429
      Location:354 → 642
      GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
      PLN02769
      Location:19 → 654
      PLN02769; Probable galacturonosyltransferase

    2. XM_021445751.1 → XP_021301426.1  probable galacturonosyltransferase 7 isoform X2

      UniProtKB/TrEMBL
      A0A921QDS7
      Conserved Domains (1) summary
      PLN02769
      Location:19 → 653
      PLN02769; Probable galacturonosyltransferase
    Nucleotide Protein
    Heading Accession and Version

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