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    LOC8080548 protein GDAP2 homolog [ Sorghum bicolor (sorghum) ]

    Gene ID: 8080548, updated on 10-Mar-2023

    Summary

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    Gene symbol
    LOC8080548
    Gene description
    protein GDAP2 homolog
    Locus tag
    SORBI_3001G501900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sorghum bicolor
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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    Genomic context

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    See LOC8080548 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 1 NC_012870.2 (77077362..77082386)

    Chromosome 1 - NC_012870.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110435603 Neighboring gene lysine-specific demethylase SE14 Neighboring gene inorganic phosphate transporter 1-2 Neighboring gene probable inorganic phosphate transporter 1-12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012870.2 Chromosome 1 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    protein GDAP2 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Genomic

    1. NC_012870.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

      Range
      77077362..77082386
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021450979.1 → XP_021306654.1  protein GDAP2 homolog

      UniProtKB/TrEMBL
      A0A921S6T6, C5WXV8
      Conserved Domains (2) summary
      cd02905
      Location:98 → 266
      Macro_GDAP2-like; macrodomain, GDAP2-like family
      pfam13716
      Location:425 → 558
      CRAL_TRIO_2; Divergent CRAL/TRIO domain

    2. XM_002465799.2 → XP_002465844.1  protein GDAP2 homolog

      See identical proteins and their annotated locations for XP_002465844.1

      UniProtKB/TrEMBL
      A0A921S6T6, C5WXV8
      Conserved Domains (2) summary
      cd02905
      Location:98 → 266
      Macro_GDAP2-like; macrodomain, GDAP2-like family
      pfam13716
      Location:425 → 558
      CRAL_TRIO_2; Divergent CRAL/TRIO domain
    Nucleotide Protein
    Heading Accession and Version

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