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    CTRG_00451 hypothetical protein [ Candida tropicalis MYA-3404 ]

    Gene ID: 8298175, updated on 17-May-2024

    Summary

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    Gene symbol
    CTRG_00451
    Gene description
    hypothetical protein
    Locus tag
    CTRG_00451
    See related
    FungiDB:CTRG_00451; VEuPathDB:CTRG_00451
    Gene type
    protein coding
    RNA name
    predicted protein
    RefSeq status
    PROVISIONAL
    Organism
    Candida tropicalis MYA-3404 (strain: MYA-3404)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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    Genomic context

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    See CTRG_00451 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_003020038.1Genomic Context describing neighboring genes Neighboring gene histone H2A Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003020038.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Butler G, et al. Nature, 2009 Jun 4. PMID 19465905, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein
    XP_002545670.1
    • Candida DB at Institut Pasteur CTRG_00451

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003020038.1 Reference assembly

      Range
      970535..971776 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002545624.1 → XP_002545670.1  predicted protein [Candida tropicalis MYA-3404]

      See identical proteins and their annotated locations for XP_002545670.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C5M312
      Conserved Domains (1) summary
      COG5176
      Location:43 → 279
      MSL5; Splicing factor (branch point binding protein) [RNA processing and modification]
    Protein Accession Links
    GenPept Link UniProtKB Link
    EER35712.1

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