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    LOC7491417 subtilisin-like protease SBT3.3 [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 7491417, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC7491417
    Gene description
    subtilisin-like protease SBT3.3
    Locus tag
    POPTR_001G450600v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC7491417 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 1 NC_037285.2 (47657659..47671251)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 1 NC_037285.1 (48466923..48480505)

    Chromosome 1 - NC_037285.2Genomic Context describing neighboring genes Neighboring gene subtilisin-like protease SBT3.6 Neighboring gene subtilisin-like protease SBT3.8 Neighboring gene E3 ubiquitin-protein ligase RHA1B Neighboring gene 50S ribosomal protein L11, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    subtilisin-like protease SBT3.2; subtilisin-like protease SBT3.3; subtilisin-like protease SBT3.5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037285.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      47657659..47671251
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024600524.2 → XP_024456292.2  subtilisin-like protease SBT3.3 isoform X2

      UniProtKB/TrEMBL
      A0A2K2CDH2

    2. XM_052450129.1 → XP_052306089.1  subtilisin-like protease SBT3.3 isoform X2

      UniProtKB/TrEMBL
      A0A2K2CDH2

    3. XM_024600527.2 → XP_024456295.2  subtilisin-like protease SBT3.3 isoform X2

      UniProtKB/TrEMBL
      A0A2K2CDH2

    4. XM_052450130.1 → XP_052306090.1  subtilisin-like protease SBT3.3 isoform X2

      UniProtKB/TrEMBL
      A0A2K2CDH2

    5. XM_024600512.2 → XP_024456280.2  subtilisin-like protease SBT3.5 isoform X1

      UniProtKB/TrEMBL
      A0A2K2CDG9

    6. XM_024600529.2 → XP_024456297.2  subtilisin-like protease SBT3.5 isoform X3

      UniProtKB/TrEMBL
      A0A2K2CDH2

    7. XM_024600536.2 → XP_024456304.2  subtilisin-like protease SBT3.2 isoform X4

    Nucleotide Protein
    Heading Accession and Version

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