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    BSCL2 BSCL2 lipid droplet biogenesis associated, seipin [ Gopherus flavomarginatus (Mexican gopher tortoise) ]

    Gene ID: 127054597, updated on 24-Mar-2024

    Summary

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    Gene symbol
    BSCL2
    Gene description
    BSCL2 lipid droplet biogenesis associated, seipin
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gopherus flavomarginatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Gopherus
    Orthologs
    human mouse all
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    Genomic context

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    See BSCL2 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_02 current rGopFla2.mat.asm (GCF_025201925.1) 6 NC_066622.1 (34204905..34214771, complement)

    Chromosome 6 - NC_066622.1Genomic Context describing neighboring genes Neighboring gene zinc transporter 1-like Neighboring gene LRRN4 C-terminal like Neighboring gene adenylosuccinate synthetase isozyme 2-like Neighboring gene G protein subunit gamma 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_066622.1 Chromosome 6 Reference rGopFla2.mat.asm

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in lipid droplet organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lipid storage IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    seipin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_025201925.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference rGopFla2.mat.asm

    Genomic

    1. NC_066622.1 Reference rGopFla2.mat.asm

      Range
      34204905..34214771 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_050960888.1 → XP_050816845.1  seipin isoform X1

    2. XM_050960886.1 → XP_050816843.1  seipin isoform X1

    3. XM_050960890.1 → XP_050816847.1  seipin isoform X3

    4. XM_050960885.1 → XP_050816842.1  seipin isoform X1

    5. XM_050960889.1 → XP_050816846.1  seipin isoform X2

    Nucleotide Protein
    Heading Accession and Version

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