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    PT1 Phosphate transporter 1 [ Solanum lycopersicum (tomato) ]

    Gene ID: 544136, updated on 1-Nov-2024

    Summary

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    Gene symbol
    PT1
    Gene description
    Phosphate transporter 1
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Solanum lycopersicum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
    Also known as
    LePT1
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    Genomic context

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    See PT1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_09 current SLM_r2.1 (GCF_036512215.1) 9 NC_090808.1 (67102077..67105882)
    103 previous assembly SL3.0 (GCF_000188115.4) 9 NC_015446.3 (70098770..70102574)

    Chromosome 9 - NC_090808.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101250839 Neighboring gene serine/threonine-protein phosphatase PP1 Neighboring gene phosphate transporter 3 Neighboring gene phosphoenolpyruvate carboxylase kinase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Functional analysis and cell-specific expression of a phosphate transporter from tomato. Daram P, et al. Planta, 1998 Oct. PMID 9737001
    2. Tomato phosphate transporter genes are differentially regulated in plant tissues by phosphorus. Liu C, et al. Plant Physiol, 1998 Jan. PMID 9449838, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phosphate ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphate transporter 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001247432.2 → NP_001234361.2  phosphate transporter 1

      See identical proteins and their annotated locations for NP_001234361.2

      Status: VALIDATED

      Source sequence(s)
      AF022873
      UniProtKB/TrEMBL
      O22548, O82003
      Conserved Domains (2) summary
      cd06174
      Location:24 → 504
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      TIGR00887
      Location:10 → 517
      2A0109; phosphate:H+ symporter

    RefSeqs of Annotated Genomes: GCF_036512215.1-RS_2024_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SLM_r2.1 Primary Assembly

    Genomic

    1. NC_090808.1 Reference SLM_r2.1 Primary Assembly

      Range
      67102077..67105882
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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