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    MICPUN_81649 Multidrug/Oligosaccharidyl-lipid/Polysaccharide flippase [ Micromonas commoda ]

    Gene ID: 8243464, updated on 16-Nov-2023

    Summary

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    Gene symbol
    MICPUN_81649
    Gene description
    Multidrug/Oligosaccharidyl-lipid/Polysaccharide flippase
    Locus tag
    MICPUN_81649
    Gene type
    protein coding
    RNA name
    Multidrug/Oligosaccharidyl-lipid/Polysaccharide flippase
    RefSeq status
    PROVISIONAL
    Organism
    Micromonas commoda (strain: RCC299)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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    Genomic context

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    See MICPUN_81649 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_013042.1 (856155..857816)

    Chromosome 5 - NC_013042.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013042.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables xenobiotic transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in xenobiotic detoxification by transmembrane export across the plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    Multidrug/Oligosaccharidyl-lipid/Polysaccharide flippase
    XP_002502177.1
    • multidrug efflux

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013042.1 Reference assembly

      Range
      856155..857816
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002502131.1 → XP_002502177.1  Multidrug/Oligosaccharidyl-lipid/Polysaccharide flippase [Micromonas commoda]

      See identical proteins and their annotated locations for XP_002502177.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C1E6I3
      Conserved Domains (2) summary
      COG0534
      Location:11 → 447
      NorM; Na+-driven multidrug efflux pump [Defense mechanisms]
      cd13132
      Location:14 → 451
      MATE_eukaryotic; Eukaryotic members of the multidrug and toxic compound extrusion (MATE) family
    Nucleotide Protein
    Heading Accession and Version

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