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    LOC100257613 binding partner of ACD11 1 [ Vitis vinifera (wine grape) ]

    Gene ID: 100257613, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC100257613
    Gene description
    binding partner of ACD11 1
    Locus tag
    VIT_00011379001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100257613 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 14 NC_081818.1 (29377195..29387349, complement)
    102 previous assembly 12X (GCF_000003745.3) 14 NC_012020.3 (29168245..29178363, complement)

    Chromosome 14 - NC_081818.1Genomic Context describing neighboring genes Neighboring gene homeobox-leucine zipper protein ATHB-13 Neighboring gene uncharacterized protein At5g39865 Neighboring gene transcription factor PRE6 Neighboring gene F-box/kelch-repeat protein At3g06240-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo transcriptome characterization of Vitis vinifera cv. Corvina unveils varietal diversity. Venturini L, et al. BMC Genomics, 2013 Jan 18. PMID 23331995, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    binding partner of ACD11 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081818.1 Reference ASM3070453v1 Primary Assembly

      Range
      29377195..29387349 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002283025.4 → XP_002283061.1  binding partner of ACD11 1

      UniProtKB/TrEMBL
      A5BVJ2
      Conserved Domains (1) summary
      PLN03121
      Location:1 → 262
      PLN03121; nucleic acid binding protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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