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    LOC100254163 phytanoyl-CoA dioxygenase [ Vitis vinifera (wine grape) ]

    Gene ID: 100254163, updated on 23-Oct-2023

    Summary

    Gene symbol
    LOC100254163
    Gene description
    phytanoyl-CoA dioxygenase
    Locus tag
    VIT_00011739001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
    Also known as
    GO:0016702
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    Genomic context

    See LOC100254163 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 1 NC_081805.1 (4634394..4644393)
    102 previous assembly 12X (GCF_000003745.3) 1 NC_012007.3 (4673767..4683773)

    Chromosome 1 - NC_081805.1Genomic Context describing neighboring genes Neighboring gene 10 kDa chaperonin, mitochondrial Neighboring gene protein ESMERALDA 1 Neighboring gene WUSCHEL-related homeobox 1 Neighboring gene uncharacterized LOC100249059

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    phytanoyl-CoA dioxygenase
    Names
    phytanoyl-CoA dioxygenase domain-containing protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081805.1 Reference ASM3070453v1 Primary Assembly

      Range
      4634394..4644393
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002284433.5XP_002284469.1  phytanoyl-CoA dioxygenase

      See identical proteins and their annotated locations for XP_002284469.1

      UniProtKB/TrEMBL
      D7T8S3
      Conserved Domains (1) summary
      pfam05721
      Location:15252
      PhyH; Phytanoyl-CoA dioxygenase (PhyH)