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    LOC8284264 RING-H2 finger protein ATL52 [ Ricinus communis (castor bean) ]

    Gene ID: 8284264, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC8284264
    Gene description
    RING-H2 finger protein ATL52
    Locus tag
    RCOM_1516740
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ricinus communis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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    Genomic context

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    See LOC8284264 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current ASM1957865v1 (GCF_019578655.1) 10 NC_063265.1 (8996802..9000297, complement)
    101 previous assembly JCVI_RCG_1.1 (GCF_000151685.1) Unplaced Scaffold NW_002994431.1 (275732..277226)

    Chromosome 10 - NC_063265.1Genomic Context describing neighboring genes Neighboring gene putative acyl-activating enzyme 19 Neighboring gene non-specific phospholipase C4 Neighboring gene uncharacterized LOC8284263 Neighboring gene protein SCAI Neighboring gene uncharacterized LOC107261640

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RING-H2 finger protein ATL51; RING-H2 finger protein ATL52

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Ricinus communis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1957865v1

    Genomic

    1. NC_063265.1 Reference ASM1957865v1

      Range
      8996802..9000297 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_048370301.1 → XP_048226258.1  RING-H2 finger protein ATL52 isoform X4

    2. XM_048370300.1 → XP_048226257.1  RING-H2 finger protein ATL52 isoform X3

    3. XM_025158211.2 → XP_025013979.2  RING-H2 finger protein ATL52 isoform X1

    4. XM_048370299.1 → XP_048226256.1  RING-H2 finger protein ATL51 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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