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    MGRN1 mahogunin ring finger 1 [ Corvus hawaiiensis (hawaiian crow) ]

    Gene ID: 125334271, updated on 3-Aug-2024

    Summary

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    Gene symbol
    MGRN1
    Gene description
    mahogunin ring finger 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Corvus hawaiiensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
    Orthologs
    human mouse all
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    Genomic context

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    See MGRN1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    100 current bCorHaw1.pri.cur (GCF_020740725.1) 16 NC_063228.1 (13986474..14036548, complement)

    Chromosome 16 - NC_063228.1Genomic Context describing neighboring genes Neighboring gene N-alpha-acetyltransferase 60, NatF catalytic subunit Neighboring gene nudix hydrolase 16 like 1 Neighboring gene uncharacterized LOC125334225 Neighboring gene UBA like domain containing 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_063228.1 Chromosome 16 Reference bCorHaw1.pri.cur Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endosome to lysosome transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of cAMP-mediated signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase MGRN1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Corvus hawaiiensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bCorHaw1.pri.cur Primary Assembly

    Genomic

    1. NC_063228.1 Reference bCorHaw1.pri.cur Primary Assembly

      Range
      13986474..14036548 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_048320970.1 → XP_048176927.1  E3 ubiquitin-protein ligase MGRN1 isoform X1

    2. XM_048320971.1 → XP_048176928.1  E3 ubiquitin-protein ligase MGRN1 isoform X2

    3. XM_048320974.1 → XP_048176931.1  E3 ubiquitin-protein ligase MGRN1 isoform X5

    4. XM_048320972.1 → XP_048176929.1  E3 ubiquitin-protein ligase MGRN1 isoform X3

    5. XM_048320975.1 → XP_048176932.1  E3 ubiquitin-protein ligase MGRN1 isoform X6

    6. XM_048320973.1 → XP_048176930.1  E3 ubiquitin-protein ligase MGRN1 isoform X4

    Nucleotide Protein
    Heading Accession and Version

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