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    THAPSDRAFT_21855 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

    Gene ID: 7451292, updated on 18-Jun-2017

    Summary

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    Gene symbol
    THAPSDRAFT_21855
    Gene description
    hypothetical protein
    Locus tag
    THAPSDRAFT_21855
    Gene type
    protein coding
    RNA name
    predicted protein
    RefSeq status
    PROVISIONAL
    Organism
    Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
    Lineage
    Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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    Genomic context

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    See THAPSDRAFT_21855 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_012066.1 (1459108..1462446)

    Chromosome 3 - NC_012066.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012066.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
    2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012066.1 Reference assembly

      Range
      1459108..1462446
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002288400.1 → XP_002288436.1  predicted protein [Thalassiosira pseudonana CCMP1335]

      See identical proteins and their annotated locations for XP_002288436.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B8BYE0
      Conserved Domains (4) summary
      smart00233
      Location:508 → 575
      PH; Pleckstrin homology domain
      pfam00169
      Location:508 → 575
      PH; PH domain
      pfam07059
      Location:757 → 1018
      DUF1336; Protein of unknown function (DUF1336)
      cl17171
      Location:381 → 431
      PH-like; Pleckstrin homology-like domain
    Nucleotide Protein
    Heading Accession and Version

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