U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    RAI14 retinoic acid induced 14 [ Gallus gallus (chicken) ]

    Gene ID: 427431, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Symbol
    RAI14provided by CGNC
    Full Name
    retinoic acid induced 14provided by CGNC
    Primary source
    CGNC:2438
    See related
    Ensembl:ENSGALG00010013214
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RAI14 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (11009568..11102440)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (11009568..11102440)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107051929 Neighboring gene C1q and TNF related 3 Neighboring gene uncharacterized LOC107051930 Neighboring gene RAD1 checkpoint DNA exonuclease Neighboring gene BRX1, biogenesis of ribosomes

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ankycorbin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      11009568..11102440
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046905976.1 → XP_046761932.1  ankycorbin isoform X5

    2. XM_004937176.5 → XP_004937233.1  ankycorbin isoform X7

      Conserved Domains (5) summary
      cd00204
      Location:81 → 205
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:90 → 182
      Ank_2; Ankyrin repeats (3 copies)
      pfam13857
      Location:171 → 224
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]
      cl02098
      Location:534 → 672
      14-3-3; 14-3-3 domain

    3. XM_040656513.2 → XP_040512447.1  ankycorbin isoform X8

      Conserved Domains (4) summary
      COG1196
      Location:523 → 898
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:317 → 611
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]
      cl39094
      Location:23 → 237
      Ank_2; Ankyrin repeats (3 copies)

    4. XM_040656515.2 → XP_040512449.1  ankycorbin isoform X9

      UniProtKB/TrEMBL
      A0A8V0YIA7
      Related
      ENSGALP00010018575.1, ENSGALT00010031728.1
      Conserved Domains (4) summary
      COG1196
      Location:495 → 870
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:278 → 583
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]
      cl39094
      Location:23 → 237
      Ank_2; Ankyrin repeats (3 copies)

    5. XM_004937179.4 → XP_004937236.1  ankycorbin isoform X10

      UniProtKB/TrEMBL
      A0A1D5P991
      Conserved Domains (5) summary
      PHA03095
      Location:12 → 224
      PHA03095; ankyrin-like protein; Provisional
      COG1196
      Location:494 → 869
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:288 → 582
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:90 → 182
      Ank_2; Ankyrin repeats (3 copies)

    6. XM_015277511.4 → XP_015132997.1  ankycorbin isoform X7

      Conserved Domains (5) summary
      cd00204
      Location:81 → 205
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:90 → 182
      Ank_2; Ankyrin repeats (3 copies)
      pfam13857
      Location:171 → 224
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]
      cl02098
      Location:534 → 672
      14-3-3; 14-3-3 domain

    7. XM_040656517.2 → XP_040512451.1  ankycorbin isoform X10

      Conserved Domains (5) summary
      PHA03095
      Location:12 → 224
      PHA03095; ankyrin-like protein; Provisional
      COG1196
      Location:494 → 869
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:288 → 582
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:90 → 182
      Ank_2; Ankyrin repeats (3 copies)

    8. XM_015277512.3 → XP_015132998.1  ankycorbin isoform X7

      Conserved Domains (5) summary
      cd00204
      Location:81 → 205
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam12796
      Location:90 → 182
      Ank_2; Ankyrin repeats (3 copies)
      pfam13857
      Location:171 → 224
      Ank_5; Ankyrin repeats (many copies)
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]
      cl02098
      Location:534 → 672
      14-3-3; 14-3-3 domain

    9. XM_040656514.2 → XP_040512448.1  ankycorbin isoform X8

      Conserved Domains (4) summary
      COG1196
      Location:523 → 898
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:317 → 611
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]
      cl39094
      Location:23 → 237
      Ank_2; Ankyrin repeats (3 copies)

    10. XM_040656516.2 → XP_040512450.1  ankycorbin isoform X9

      UniProtKB/TrEMBL
      A0A8V0YIA7
      Conserved Domains (4) summary
      COG1196
      Location:495 → 870
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:278 → 583
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      sd00045
      Location:86 → 116
      ANK; ANK repeat [structural motif]
      cl39094
      Location:23 → 237
      Ank_2; Ankyrin repeats (3 copies)

    11. XM_046905977.1 → XP_046761933.1  ankycorbin isoform X7

    12. XM_015277507.3 → XP_015132993.3  ankycorbin isoform X1

    13. XM_015277508.3 → XP_015132994.3  ankycorbin isoform X2

    14. XM_015277509.3 → XP_015132995.3  ankycorbin isoform X3

    15. XM_015277510.3 → XP_015132996.3  ankycorbin isoform X4

    16. XM_040656512.1 → XP_040512446.1  ankycorbin isoform X6

      Conserved Domains (4) summary
      COG1196
      Location:526 → 901
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:309 → 614
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      sd00045
      Location:88 → 118
      ANK; ANK repeat [structural motif]
      cl39094
      Location:25 → 239
      Ank_2; Ankyrin repeats (3 copies)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      11009568..11102440
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046935429.1 → XP_046791385.1  ankycorbin isoform X5

    2. XM_046935431.1 → XP_046791387.1  ankycorbin isoform X7

    3. XM_046935435.1 → XP_046791391.1  ankycorbin isoform X8

    4. XM_046935437.1 → XP_046791393.1  ankycorbin isoform X9

      UniProtKB/TrEMBL
      A0A8V0YIA7

    5. XM_046935439.1 → XP_046791395.1  ankycorbin isoform X10

    6. XM_046935432.1 → XP_046791388.1  ankycorbin isoform X7

    7. XM_046935440.1 → XP_046791396.1  ankycorbin isoform X10

    8. XM_046935433.1 → XP_046791389.1  ankycorbin isoform X7

    9. XM_046935436.1 → XP_046791392.1  ankycorbin isoform X8

    10. XM_046935438.1 → XP_046791394.1  ankycorbin isoform X9

      UniProtKB/TrEMBL
      A0A8V0YIA7

    11. XM_046935434.1 → XP_046791390.1  ankycorbin isoform X7

    12. XM_046935425.1 → XP_046791381.1  ankycorbin isoform X1

    13. XM_046935426.1 → XP_046791382.1  ankycorbin isoform X2

    14. XM_046935427.1 → XP_046791383.1  ankycorbin isoform X3

    15. XM_046935428.1 → XP_046791384.1  ankycorbin isoform X4

    16. XM_046935430.1 → XP_046791386.1  ankycorbin isoform X6

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials