U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    TOR4A torsin family 4 member A [ Gallus gallus (chicken) ]

    Gene ID: 417257, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    TOR4Aprovided by CGNC
    Official Full Name
    torsin family 4 member Aprovided by CGNC
    Primary source
    CGNC:6546
    See related
    Ensembl:ENSGALG00010027896
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    C9ORF167; C17H9orf167
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TOR4A in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 17 NC_052548.1 (2470074..2476867)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 17 NC_052589.1 (1878291..1885086)

    Chromosome 17 - NC_052548.1Genomic Context describing neighboring genes Neighboring gene SS nuclear autoantigen 1 Neighboring gene anaphase promoting complex subunit 2 Neighboring gene discoidin domain receptor tyrosine kinase 2 like Neighboring gene microRNA 1707 Neighboring gene uncharacterized LOC121107056 Neighboring gene ciliary microtubule inner protein 2A

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum lumen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    torsin-4A

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052548.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2470074..2476867
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015279673.4 → XP_015135159.1  torsin-4A

      UniProtKB/TrEMBL
      A0A8V1ADR2, F1NLT2
      Related
      ENSGALP00010041374.1, ENSGALT00010067631.1
      Conserved Domains (2) summary
      COG0542
      Location:269 → 489
      ClpA; ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]
      pfam06309
      Location:269 → 345
      Torsin

    2. XM_046901949.1 → XP_046757905.1  torsin-4A

      UniProtKB/TrEMBL
      A0A8V1ADR2, F1NLT2

    3. XM_415532.8 → XP_415532.3  torsin-4A

      See identical proteins and their annotated locations for XP_415532.3

      UniProtKB/TrEMBL
      A0A8V1ADR2, F1NLT2
      Conserved Domains (2) summary
      COG0542
      Location:269 → 489
      ClpA; ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]
      pfam06309
      Location:269 → 345
      Torsin

    4. XM_040649230.2 → XP_040505164.1  torsin-4A

      UniProtKB/TrEMBL
      A0A8V1ADR2, F1NLT2
      Related
      ENSGALP00010041369.1, ENSGALT00010067626.1
      Conserved Domains (2) summary
      COG0542
      Location:269 → 489
      ClpA; ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]
      pfam06309
      Location:269 → 345
      Torsin

    5. XM_015279672.4 → XP_015135158.1  torsin-4A

      UniProtKB/TrEMBL
      A0A8V1ADR2, F1NLT2
      Related
      ENSGALP00010041373.1, ENSGALT00010067630.1
      Conserved Domains (2) summary
      COG0542
      Location:269 → 489
      ClpA; ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]
      pfam06309
      Location:269 → 345
      Torsin

    6. XM_004945789.5 → XP_004945846.1  torsin-4A

      See identical proteins and their annotated locations for XP_004945846.1

      UniProtKB/TrEMBL
      A0A8V1ADR2, F1NLT2
      Related
      ENSGALP00010041360.1, ENSGALT00010067617.1
      Conserved Domains (2) summary
      COG0542
      Location:269 → 489
      ClpA; ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]
      pfam06309
      Location:269 → 345
      Torsin

    7. XM_046901950.1 → XP_046757906.1  torsin-4A

      UniProtKB/TrEMBL
      A0A8V1ADR2, F1NLT2
      Related
      ENSGALP00010041358.1, ENSGALT00010067615.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052589.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1878291..1885086
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040685769.2 → XP_040541703.1  torsin-4A

      UniProtKB/TrEMBL
      A0A8V1ADR2
      Conserved Domains (1) summary
      COG0542
      Location:269 → 489
      ClpA; ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]

    2. XM_046929182.1 → XP_046785138.1  torsin-4A

      UniProtKB/TrEMBL
      A0A8V1ADR2

    3. XM_040685768.2 → XP_040541702.1  torsin-4A

      UniProtKB/TrEMBL
      A0A8V1ADR2
      Conserved Domains (1) summary
      COG0542
      Location:269 → 489
      ClpA; ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]

    4. XM_040685770.2 → XP_040541704.1  torsin-4A

      UniProtKB/TrEMBL
      A0A8V1ADR2
      Conserved Domains (1) summary
      COG0542
      Location:269 → 489
      ClpA; ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]

    5. XM_040685766.2 → XP_040541700.1  torsin-4A

      UniProtKB/TrEMBL
      A0A8V1ADR2
      Conserved Domains (1) summary
      COG0542
      Location:269 → 489
      ClpA; ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]

    6. XM_040685767.2 → XP_040541701.1  torsin-4A

      UniProtKB/TrEMBL
      A0A8V1ADR2
      Conserved Domains (1) summary
      COG0542
      Location:269 → 489
      ClpA; ATP-dependent Clp protease ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones]

    7. XM_046929183.1 → XP_046785139.1  torsin-4A

      UniProtKB/TrEMBL
      A0A8V1ADR2
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.