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    Eukaryotic aspartyl protease family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816927, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Eukaryotic aspartyl protease family protein
    Primary source
    TAIR:AT2G23945
    Locus tag
    AT2G23945
    See related
    Araport:AT2G23945
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (10185229..10186738, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene Putative small nuclear ribonucleoprotein G Neighboring gene transmembrane protein (DUF788) Neighboring gene ncRNA Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene Class I glutamine amidotransferase-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_127956.2

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Eukaryotic aspartyl protease family protein
    NP_565559.1
    • Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G30030.1); Has 2014 Blast hits to 2006 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 158; Fungi - 70; Plants - 1675; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      10185229..10186738 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127956.2 → NP_565559.1  Eukaryotic aspartyl protease family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565559.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X0R4, A0A654F6B4, Q8S8N7
      Conserved Domains (3) summary
      cd05476
      Location:96 → 448
      pepsin_A_like_plant; Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants
      PLN03146
      Location:7 → 450
      PLN03146; aspartyl protease family protein; Provisional
      cl11403
      Location:101 → 151
      pepsin_retropepsin_like; Cellular and retroviral pepsin-like aspartate proteases
    Nucleotide Protein
    Heading Accession and Version

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