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    LOC107222788 synaptic vesicle glycoprotein 2C [ Neodiprion lecontei (redheaded pine sawfly) ]

    Gene ID: 107222788, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC107222788
    Gene description
    synaptic vesicle glycoprotein 2C
    See related
    EnsemblRapid:ENSNLCG00000004442
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Neodiprion lecontei
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Tenthredinoidea; Diprionidae; Diprioninae; Neodiprion
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    Genomic context

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    See LOC107222788 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    101 current iyNeoLeco1.1 (GCF_021901455.1) 3 NC_060262.1 (19423759..19430771, complement)
    100 previous assembly Nlec1.0 (GCF_001263575.1) Unplaced Scaffold NW_015384857.1 (8054..15154)

    Chromosome 3 - NC_060262.1Genomic Context describing neighboring genes Neighboring gene odorant receptor 22c-like Neighboring gene probable multidrug resistance-associated protein lethal(2)03659 Neighboring gene serine-rich adhesin for platelets-like Neighboring gene single stranded-binding protein c31A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Support for the adaptive decoupling hypothesis from whole-transcriptome profiles of a hypermetamorphic and sexually dimorphic insect, Neodiprion lecontei. Herrig DK, et al. Mol Ecol, 2021 Sep. PMID 34174126
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptic vesicle glycoprotein 2C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Neodiprion lecontei Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference iyNeoLeco1.1

    Genomic

    1. NC_060262.1 Reference iyNeoLeco1.1

      Range
      19423759..19430771 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015662293.2 → XP_015517779.2  synaptic vesicle glycoprotein 2C isoform X2

      UniProtKB/TrEMBL
      A0A6J0BTP5
      Related
      ENSNLCP00000008254.1, ENSNLCT00000009389.1

    2. XM_046736053.1 → XP_046592009.1  synaptic vesicle glycoprotein 2C isoform X1

      UniProtKB/TrEMBL
      A0A6J0BTP5
    Nucleotide Protein
    Heading Accession and Version

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