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    LOC107222787 probable multidrug resistance-associated protein lethal(2)03659 [ Neodiprion lecontei (redheaded pine sawfly) ]

    Gene ID: 107222787, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC107222787
    Gene description
    probable multidrug resistance-associated protein lethal(2)03659
    See related
    EnsemblRapid:ENSNLCG00000002964
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Neodiprion lecontei
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Tenthredinoidea; Diprionidae; Diprioninae; Neodiprion
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    Genomic context

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    See LOC107222787 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    101 current iyNeoLeco1.1 (GCF_021901455.1) 3 NC_060262.1 (19403727..19418868)
    100 previous assembly Nlec1.0 (GCF_001263575.1) Unplaced Scaffold NW_015384857.1 (19792..34845, complement)

    Chromosome 3 - NC_060262.1Genomic Context describing neighboring genes Neighboring gene odorant receptor 13a-like Neighboring gene odorant receptor 22c-like Neighboring gene synaptic vesicle glycoprotein 2C Neighboring gene serine-rich adhesin for platelets-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Support for the adaptive decoupling hypothesis from whole-transcriptome profiles of a hypermetamorphic and sexually dimorphic insect, Neodiprion lecontei. Herrig DK, et al. Mol Ecol, 2021 Sep. PMID 34174126
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable multidrug resistance-associated protein lethal(2)03659

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Neodiprion lecontei Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference iyNeoLeco1.1

    Genomic

    1. NC_060262.1 Reference iyNeoLeco1.1

      Range
      19403727..19418868
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046736050.1 → XP_046592006.1  probable multidrug resistance-associated protein lethal(2)03659 isoform X1

      UniProtKB/TrEMBL
      A0A6J0BUT4

    2. XM_046736052.1 → XP_046592008.1  probable multidrug resistance-associated protein lethal(2)03659 isoform X2

      Related
      ENSNLCP00000004779.1, ENSNLCT00000005885.1

    3. XM_046736049.1 → XP_046592005.1  probable multidrug resistance-associated protein lethal(2)03659 isoform X1

      UniProtKB/TrEMBL
      A0A6J0BUT4

    4. XM_015662292.2 → XP_015517778.1  probable multidrug resistance-associated protein lethal(2)03659 isoform X1

      UniProtKB/TrEMBL
      A0A6J0BUT4
      Related
      ENSNLCP00000004813.1, ENSNLCT00000005918.1
      Conserved Domains (4) summary
      cd03244
      Location:1039 → 1258
      ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
      cd03250
      Location:425 → 623
      ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
      TIGR01271
      Location:10 → 1265
      CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
      cl00549
      Location:763 → 995
      ABC_membrane; ABC transporter transmembrane region

    5. XM_046736051.1 → XP_046592007.1  probable multidrug resistance-associated protein lethal(2)03659 isoform X1

      UniProtKB/TrEMBL
      A0A6J0BUT4
      Related
      ENSNLCP00000004798.1, ENSNLCT00000005904.1
    Nucleotide Protein
    Heading Accession and Version

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