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    Nopp140 nucleolar and coiled-body phosphoprotein 1 [ Neodiprion lecontei (redheaded pine sawfly) ]

    Gene ID: 107225095, updated on 3-Dec-2024

    Summary

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    Gene symbol
    Nopp140
    Gene description
    nucleolar and coiled-body phosphoprotein 1
    See related
    EnsemblRapid:ENSNLCG00000015035
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Neodiprion lecontei
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Tenthredinoidea; Diprionidae; Diprioninae; Neodiprion
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See Nopp140 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current iyNeoLeco1.1 (GCF_021901455.1) 1 NC_060260.1 (24041708..24048282)
    100 previous assembly Nlec1.0 (GCF_001263575.1) Unplaced Scaffold NW_015385118.1 (11419..17169)

    Chromosome 1 - NC_060260.1Genomic Context describing neighboring genes Neighboring gene membrane-bound neuregulin protein vein Neighboring gene uncharacterized LOC107225094 Neighboring gene mitotic arrest deficient 2 Neighboring gene uncharacterized LOC107225097 Neighboring gene dihydroorotate dehydrogenase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Support for the adaptive decoupling hypothesis from whole-transcriptome profiles of a hypermetamorphic and sexually dimorphic insect, Neodiprion lecontei. Herrig DK, et al. Mol Ecol, 2021 Sep. PMID 34174126
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nucleolar protein dao-5
    Names
    nucleolin 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Neodiprion lecontei Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference iyNeoLeco1.1

    Genomic

    1. NC_060260.1 Reference iyNeoLeco1.1

      Range
      24041708..24048282
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015665428.2 → XP_015520914.2  nucleolar protein dao-5 isoform X1

      UniProtKB/TrEMBL
      A0A6J0C3D4
      Related
      ENSNLCP00000028519.1, ENSNLCT00000032392.1

    2. XM_015665429.2 → XP_015520915.2  nucleolar protein dao-5 isoform X2

      UniProtKB/TrEMBL
      A0A6J0C328
      Related
      ENSNLCP00000028526.1, ENSNLCT00000032400.1

    3. XM_015665430.2 → XP_015520916.2  nucleolar protein dao-5 isoform X3

      UniProtKB/TrEMBL
      A0A6J0C0Y8
      Related
      ENSNLCP00000028532.1, ENSNLCT00000032409.1

    RNA

    1. XR_006902537.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases