U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    TNRC6C trinucleotide repeat containing adaptor 6C [ Pipistrellus kuhlii (Kuhl's pipistrelle) ]

    Gene ID: 118704471, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TNRC6C
    Gene description
    trinucleotide repeat containing adaptor 6C
    Locus tag
    mPipKuh1_017849
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pipistrellus kuhlii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Pipistrellus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TNRC6C in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    101 current mPipKuh1.p (GCF_014108245.1) Unplaced Scaffold NW_023425545.1 (1588386..1629144)

    NW_023425545.1Genomic Context describing neighboring genes Neighboring gene RNA transcription, translation and transport factor protein-like Neighboring gene septin 9 Neighboring gene transmembrane channel like 6 Neighboring gene transmembrane channel like 8

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_023425545 Unplaced Scaffold Reference mPipKuh1.p

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in miRNA-mediated post-transcriptional gene silencing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of nuclear-transcribed mRNA poly(A) tail shortening IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    trinucleotide repeat-containing gene 6C protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Pipistrellus kuhlii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mPipKuh1.p

    Genomic

    1. NW_023425545.1 Reference mPipKuh1.p

      Range
      1588386..1629144
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045572121.1 → XP_045428077.1  trinucleotide repeat-containing gene 6C protein isoform X4

      UniProtKB/TrEMBL
      A0A7J7SEX8

    2. XM_045572119.1 → XP_045428075.1  trinucleotide repeat-containing gene 6C protein isoform X3

      UniProtKB/TrEMBL
      A0A7J7SEX8

    3. XM_045572122.1 → XP_045428078.1  trinucleotide repeat-containing gene 6C protein isoform X5

      UniProtKB/TrEMBL
      A0A7J7SEX8

    4. XM_045572118.1 → XP_045428074.1  trinucleotide repeat-containing gene 6C protein isoform X1

      UniProtKB/TrEMBL
      A0A7J7SEX8

    5. XM_036412182.2 → XP_036268075.2  trinucleotide repeat-containing gene 6C protein isoform X2

      UniProtKB/TrEMBL
      A0A7J7SEZ6
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.