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    KCNIP3 potassium voltage-gated channel interacting protein 3 [ Macaca fascicularis (crab-eating macaque) ]

    Gene ID: 102116520, updated on 3-Dec-2024

    Summary

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    Gene symbol
    KCNIP3
    Gene description
    potassium voltage-gated channel interacting protein 3
    See related
    Ensembl:ENSMFAG00000042264
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca fascicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See KCNIP3 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 13 NC_088387.1 (974714..1066538)
    102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 13 NC_052267.1 (11263889..11357501, complement)

    Chromosome 13 - NC_088387.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135966892 Neighboring gene zinc finger protein 892 Neighboring gene prominin 2 Neighboring gene uncharacterized LOC123568328 Neighboring gene fumarylacetoacetate hydrolase domain-containing protein 2A Neighboring gene fumarylacetoacetate hydrolase domain-containing protein 2B-like Neighboring gene glycerol-3-phosphate acyltransferase 2, mitochondrial-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables potassium channel regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated potassium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calsenilin
    Names
    Kv channel interacting protein 3, calsenilin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T2T-MFA8v1.0

    Genomic

    1. NC_088387.1 Reference T2T-MFA8v1.0

      Range
      974714..1066538
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045368838.2 → XP_045224773.1  calsenilin isoform X1

      UniProtKB/TrEMBL
      G7PMQ0
      Conserved Domains (1) summary
      COG5126
      Location:104 → 268
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    2. XM_045368839.2 → XP_045224774.1  calsenilin isoform X2

      UniProtKB/TrEMBL
      G7PMQ0, Q4R4H0
      Conserved Domains (1) summary
      COG5126
      Location:81 → 245
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    3. XM_045368840.2 → XP_045224775.2  calsenilin isoform X3

    4. XM_045368841.2 → XP_045224776.1  calsenilin isoform X4

      Conserved Domains (1) summary
      COG5126
      Location:55 → 219
      FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001287658.1: Suppressed sequence

      Description
      NM_001287658.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact [email protected] for further information.
    Nucleotide Protein
    Heading Accession and Version

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