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    Vmn1r69 vomeronasal 1 receptor 69 [ Mus musculus (house mouse) ]

    Gene ID: 252904, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Vmn1r69provided by MGI
    Official Full Name
    vomeronasal 1 receptor 69provided by MGI
    Primary source
    MGI:MGI:2182253
    See related
    Ensembl:ENSMUSG00000091662 AllianceGenome:MGI:2182253
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    V1re9
    Summary
    Orthologous to several human genes including VN1R2 (vomeronasal 1 receptor 2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Vmn1r69 in Genome Data Viewer
    Location:
    7 A1; 7 6.52 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (10313683..10315414, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (10579756..10581487, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 68 Neighboring gene STARR-seq mESC enhancer starr_18013 Neighboring gene vomeronasal 1 receptor, pseudogene 49 Neighboring gene vomeronasal 1 receptor, pseudogene 50 Neighboring gene vomeronasal 1 receptor 70

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multiple new and isolated families within the mouse superfamily of V1r vomeronasal receptors. Rodriguez I, et al. Nat Neurosci, 2002 Feb. PMID 11802169
    2. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article
    3. Extreme variability among mammalian V1R gene families. Young JM, et al. Genome Res, 2010 Jan. PMID 19952141, Free PMC Article
    4. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
    5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    vomeronasal 1 receptor, E9
    Names
    vomernasal 1 receptor Vmn1r69

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_145842.3 → NP_665841.1  vomeronasal 1 receptor, E9

      See identical proteins and their annotated locations for NP_665841.1

      Status: VALIDATED

      Source sequence(s)
      AC159008
      Consensus CDS
      CCDS20793.1
      UniProtKB/TrEMBL
      H3BJH9, Q8VIC1
      Related
      ENSMUSP00000129646.2, ENSMUST00000163658.3
      Conserved Domains (1) summary
      pfam03402
      Location:54 → 300
      V1R; Vomeronasal organ pheromone receptor family, V1R

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      10313683..10315414 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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