U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    Wdr45 WD repeat domain 45 [ Jaculus jaculus (lesser Egyptian jerboa) ]

    Gene ID: 101603163, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Wdr45
    Gene description
    WD repeat domain 45
    See related
    EnsemblRapid:ENSJJAG00000014284
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Jaculus jaculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Dipodoidea; Dipodidae; Dipodinae; Jaculus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Wdr45 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    102 current mJacJac1.mat.Y.cur (GCF_020740685.1) X NC_059125.1 (51140005..51151471, complement)
    101 previous assembly JacJac1.0 (GCF_000280705.1) Unplaced Scaffold NW_004504454.1 (4756547..4765978)

    Chromosome X - NC_059125.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 120 Neighboring gene PRA1 domain family member 2 Neighboring gene ras-related protein Rab-7a-like Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORA33

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagy of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein lipidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extrinsic component of membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in phagophore assembly site membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    WD repeat domain phosphoinositide-interacting protein 4

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Jaculus jaculus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mJacJac1.mat.Y.cur Primary Assembly

    Genomic

    1. NC_059125.1 Reference mJacJac1.mat.Y.cur Primary Assembly

      Range
      51140005..51151471 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045141120.1 → XP_044997055.1  WD repeat domain phosphoinositide-interacting protein 4 isoform X2

      UniProtKB/TrEMBL
      A0A8C5KIZ6
      Related
      ENSJJAP00000010810.1, ENSJJAT00000017275.2

    2. XM_045141119.1 → XP_044997054.1  WD repeat domain phosphoinositide-interacting protein 4 isoform X1

      UniProtKB/TrEMBL
      A0A8C5KIS8, A0A8C5KL48
      Related
      ENSJJAP00000010805.2, ENSJJAT00000017270.2
      Conserved Domains (2) summary
      sd00039
      Location:196 → 232
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:187 → 274
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.