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    SJAG_04857 ubiquitin conjugating enzyme Ubc16 [ Schizosaccharomyces japonicus yFS275 ]

    Gene ID: 7050780, updated on 18-Sep-2024

    Summary

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    Gene symbol
    SJAG_04857
    Gene description
    ubiquitin conjugating enzyme Ubc16
    Locus tag
    SJAG_04857
    See related
    FungiDB:SJAG_04857; VEuPathDB:SJAG_04857
    Gene type
    protein coding
    RNA name
    ubiquitin conjugating enzyme Ubc16
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces japonicus yFS275 (strain: yFS275)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See SJAG_04857 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    1

    NW_011627861.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene alpha,alpha-trehalase Ntp1 Neighboring gene dipeptidase Dug1 Neighboring gene asparagine-tRNA ligase Slm5 Neighboring gene RNA polymerase I transcription termination factor Reb1 Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011627861.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative functional genomics of the fission yeasts. Rhind N, et al. Science, 2011 May 20. PMID 21511999, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by JaponicusDB

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ubiquitin conjugating enzyme activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein import into peroxisome matrix IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Names
    ubiquitin conjugating enzyme Ubc16

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_011627861.1 Reference assembly

      Range
      2333382..2335742
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002175895.2 → XP_002175931.1  ubiquitin conjugating enzyme Ubc16 [Schizosaccharomyces japonicus yFS275]

      See identical proteins and their annotated locations for XP_002175931.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B6K7Y4
      Conserved Domains (2) summary
      COG5078
      Location:7 → 152
      COG5078; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
      cd00195
      Location:7 → 145
      UBCc; Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain. This is part of the ubiquitin-mediated protein degradation pathway in which a thiol-ester linkage forms between a conserved cysteine and the C-terminus of ubiquitin and complexes with ubiquitin ...
    Nucleotide Protein
    Heading Accession and Version

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