U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC123445737 protein SOSEKI 5-like [ Hordeum vulgare subsp. vulgare (domesticated barley) ]

    Gene ID: 123445737, updated on 19-Aug-2022

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC123445737
    Gene description
    protein SOSEKI 5-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hordeum vulgare subsp. vulgare (sub-species: vulgare)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC123445737 in Genome Data Viewer
    Location:
    chromosome: 3H
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current MorexV3_pseudomolecules_assembly (GCF_904849725.1) 3H NC_058520.1 (618092073..618094750, complement)

    Chromosome 3H - NC_058520.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123441203 Neighboring gene tricetin 3',4',5'-O-trimethyltransferase Neighboring gene myb-related protein MYBAS1-like Neighboring gene uncharacterized LOC123441204

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_058520.1 Chromosome 3H Reference MorexV3_pseudomolecules_assembly Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Comprehensive sequence analysis of 24,783 barley full-length cDNAs derived from 12 clone libraries. Matsumoto T, et al. Plant Physiol, 2011 May. PMID 21415278, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein SOSEKI 5-like
    Names
    predicted protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Hordeum vulgare subsp. vulgare Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference MorexV3_pseudomolecules_assembly Primary Assembly

    Genomic

    1. NC_058520.1 Reference MorexV3_pseudomolecules_assembly Primary Assembly

      Range
      618092073..618094750 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045122770.1 → XP_044978705.1  protein SOSEKI 5-like

      UniProtKB/TrEMBL
      F2CQ55
      Conserved Domains (1) summary
      pfam06136
      Location:41 → 393
      DUF966; Domain of unknown function (DUF966)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases