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    GVI51_E02145 rRNA-processing endoribonuclease [ Nakaseomyces glabratus ]

    Gene ID: 2887542, updated on 6-Dec-2024

    Summary

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    Gene symbol
    GVI51_E02145
    Gene description
    rRNA-processing endoribonuclease
    Locus tag
    GVI51_E02145
    See related
    FungiDB:GVI51_E02145; VEuPathDB:GVI51_E02145
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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    Genomic context

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    See GVI51_E02145 in Genome Data Viewer
    Location:
    chromosome: E
    Exon count:
    1
    Sequence:
    Chromosome: E; NC_088955.1 (242646..243740)

    Chromosome E - NC_088955.1Genomic Context describing neighboring genes Neighboring gene histone H2AZ Neighboring gene lysophospholipase Neighboring gene ERMES complex subunit MDM12 Neighboring gene ubiquinone-binding protein COQ10

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_088955.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • CAGL0E02343g
      Ortholog(s) have endoribonuclease activity, enzyme activator activity

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rRNA-processing endoribonuclease
    XP_445791.1
    • CAGL0E02343g
      Ortholog(s) have endoribonuclease activity, enzyme activator activity

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_088955.1 Reference assembly

      Range
      242646..243740
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_445791.1 → XP_445791.1  rRNA-processing endoribonuclease [Nakaseomyces glabratus]

      See identical proteins and their annotated locations for XP_445791.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0W0ELA7, Q6FVF3
      Conserved Domains (1) summary
      TIGR03400
      Location:8 → 364
      18S_RNA_Rcl1p; 18S rRNA biogenesis protein RCL1
    Nucleotide Protein
    Heading Accession and Version

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