U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    GVI51_I04631 proteasome regulatory particle base subunit RPT2 [ Nakaseomyces glabratus ]

    Gene ID: 2889251, updated on 6-Dec-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    GVI51_I04631
    Gene description
    proteasome regulatory particle base subunit RPT2
    Locus tag
    GVI51_I04631
    See related
    FungiDB:GVI51_I04631; VEuPathDB:GVI51_I04631
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See GVI51_I04631 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_088959.1 (448020..449321)

    Chromosome I - NC_088959.1Genomic Context describing neighboring genes Neighboring gene CHS3B Neighboring gene SNQ2 Neighboring gene proteasome core particle subunit beta 3 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_088959.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    • CAGL0I04884g
      Ortholog(s) have cytosol, nuclear chromatin, proteasome regulatory particle, base subcomplex localization

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables proteasome-activating activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome regulatory particle, base subcomplex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    proteasome regulatory particle base subunit RPT2
    XP_447462.1
    • CAGL0I04884g
      Ortholog(s) have cytosol, nuclear chromatin, proteasome regulatory particle, base subcomplex localization

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_088959.1 Reference assembly

      Range
      448020..449321
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_447462.1 → XP_447462.1  proteasome regulatory particle base subunit RPT2 [Nakaseomyces glabratus]

      See identical proteins and their annotated locations for XP_447462.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0W0D1C3, Q6FQN2
      Conserved Domains (1) summary
      PTZ00361
      Location:2 → 433
      PTZ00361; 26 proteosome regulatory subunit 4-like protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.