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    PDX3 pyridoxamine-phosphate oxidase PDX3 [ Nakaseomyces glabratus ]

    Gene ID: 2889361, updated on 6-Dec-2024

    Summary

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    Gene symbol
    PDX3
    Gene description
    pyridoxamine-phosphate oxidase PDX3
    Locus tag
    GVI51_I04455
    See related
    FungiDB:GVI51_I04455; VEuPathDB:GVI51_I04455
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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    Genomic context

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    See PDX3 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_088959.1 (424146..424829)

    Chromosome I - NC_088959.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene F1F0 ATP synthase subunit gamma Neighboring gene protein-arginine omega-N methyltransferase HMT1 Neighboring gene phosphatidate cytidylyltransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_088959.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • CAGL0I04708g
      Pyridoxamine 5?-phosphate oxidase

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables FMN binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxamine phosphate oxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in pyridoxine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyridoxamine-phosphate oxidase PDX3
    XP_447454.1
    • CAGL0I04708g
      Pyridoxamine 5?-phosphate oxidase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_088959.1 Reference assembly

      Range
      424146..424829
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_447454.1 → XP_447454.1  pyridoxamine-phosphate oxidase PDX3 [Nakaseomyces glabratus]

      See identical proteins and their annotated locations for XP_447454.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0W0DXY2, Q6FQP0
      Conserved Domains (1) summary
      COG0259
      Location:12 → 227
      PdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase [Coenzyme transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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