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    Phum_PHUM148860 uncharacterized protein [ Pediculus humanus corporis (human body louse) ]

    Gene ID: 8236388, updated on 6-Jan-2024

    Summary

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    Gene symbol
    Phum_PHUM148860
    Gene description
    uncharacterized protein
    Locus tag
    Phum_PHUM148860
    See related
    VectorBase:PHUM148860
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pediculus humanus corporis (strain: USDA, sub-species: corporis)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Psocodea; Phthiraptera; Anoplura; Pediculidae; Pediculus
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    Genomic context

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    See Phum_PHUM148860 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    12

    NW_002987105.1Genomic Context describing neighboring genes Neighboring gene cation-transporting ATPase 13a1, putative Neighboring gene 26S proteasome non-ATPase regulatory subunit, putative Neighboring gene uncharacterized protein Neighboring gene mRNA capping enzyme, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_002987105.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_002424738.1
    • encoded by transcript Phum_PHUM148860-RA
      Gene spans sequencing gaps and may be missing exons.

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_002987105.1 Reference assembly

      Range
      940833..963141 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002424693.1 → XP_002424738.1  uncharacterized protein Phum_PHUM148860 [Pediculus humanus corporis]

      See identical proteins and their annotated locations for XP_002424738.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      E0VF26
      Conserved Domains (3) summary
      cd10974
      Location:173 → 449
      CE4_CDA_like_1; Putative catalytic domain of chitin deacetylase-like proteins with additional chitin-binding peritrophin-A domain (ChBD) and/or a low-density lipoprotein receptor class A domain (LDLa)
      cd00112
      Location:98 → 132
      LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
      pfam01607
      Location:21 → 78
      CBM_14; Chitin binding Peritrophin-A domain
    Nucleotide Protein
    Heading Accession and Version

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