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    SJAG_03161 condensin complex non-SMC subunit Cnd1 [ Schizosaccharomyces japonicus yFS275 ]

    Gene ID: 7048507, updated on 18-Sep-2024

    Summary

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    Gene symbol
    SJAG_03161
    Gene description
    condensin complex non-SMC subunit Cnd1
    Locus tag
    SJAG_03161
    See related
    FungiDB:SJAG_03161; VEuPathDB:SJAG_03161
    Gene type
    protein coding
    RNA name
    condensin complex non-SMC subunit Cnd1
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces japonicus yFS275 (strain: yFS275)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See SJAG_03161 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_011627861.1Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase Ste13 Neighboring gene hypothetical protein Neighboring gene CDC7 protein kinase Hsk1 Neighboring gene 60S ribosomal protein L28 Neighboring gene phospholipid-diacylglycerol acyltransferase Plh1 Neighboring gene dihydrolipoamide S-succinyltransferase Neighboring gene orotidine 5'-phosphate decarboxylase Ura4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011627861.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative functional genomics of the fission yeasts. Rhind N, et al. Science, 2011 May 20. PMID 21511999, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by JaponicusDB

    Function Evidence Code Pubs
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-DNA tethering activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables double-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables single-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables topological DNA co-entrapment activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in meiotic chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in mitotic chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of condensin complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in euchromatin IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in nucleolar peripheral inclusion body IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Names
    condensin complex non-SMC subunit Cnd1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_011627861.1 Reference assembly

      Range
      551453..555310
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002174291.2 → XP_002174327.1  condensin complex non-SMC subunit Cnd1 [Schizosaccharomyces japonicus yFS275]

      See identical proteins and their annotated locations for XP_002174327.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B6K3H7
      Conserved Domains (3) summary
      COG5098
      Location:8 → 1147
      COG5098; Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning]
      pfam12717
      Location:964 → 1132
      Cnd1; non-SMC mitotic condensation complex subunit 1
      pfam12922
      Location:72 → 232
      Cnd1_N; non-SMC mitotic condensation complex subunit 1, N-term
    Nucleotide Protein
    Heading Accession and Version

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