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    NGFR nerve growth factor receptor [ Varanus komodoensis (Komodo dragon) ]

    Gene ID: 123030616, updated on 22-Mar-2024

    Summary

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    Gene symbol
    NGFR
    Gene description
    nerve growth factor receptor
    Locus tag
    EYD10_13657
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Varanus komodoensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Anguimorpha; Paleoanguimorpha; Varanoidea; Varanidae; Varanus
    Also known as
    NGFR_0
    Orthologs
    human mouse all
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    Genomic context

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    See NGFR in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current ASM479886v1 (GCF_004798865.1) Unplaced Scaffold NW_025336011.1 (3524802..3563751)

    NW_025336011.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 652 Neighboring gene prohibitin 1 Neighboring gene speckle type BTB/POZ protein Neighboring gene neurexophilin 3 Neighboring gene solute carrier family 35 member B1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_025336011 Unplaced Scaffold Reference ASM479886v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables coreceptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables death receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nerve growth factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Rho protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tumor necrosis factor receptor superfamily member 16
    Names
    Tumor necrosis factor receptor superfamily member 16

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Varanus komodoensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM479886v1

    Genomic

    1. NW_025336011.1 Reference ASM479886v1

      Range
      3524802..3563751
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044444689.1 → XP_044300624.1  tumor necrosis factor receptor superfamily member 16 isoform X2

      Conserved Domains (2) summary
      cd08311
      Location:248 → 326
      Death_p75NR; Death domain of p75 Neurotrophin Receptor
      cl22855
      Location:1 → 94
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)

    2. XM_044444688.1 → XP_044300623.1  tumor necrosis factor receptor superfamily member 16 isoform X1

      Conserved Domains (2) summary
      cd08311
      Location:259 → 337
      Death_p75NR; Death domain of p75 Neurotrophin Receptor
      cl22855
      Location:1 → 94
      TNFRSF; Tumor necrosis factor receptor superfamily (TNFRSF)
    Nucleotide Protein
    Heading Accession and Version

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