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    LOC122991119 cationic amino acid transporter 2-like [ Thunnus albacares (yellowfin tuna) ]

    Gene ID: 122991119, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC122991119
    Gene description
    cationic amino acid transporter 2-like
    See related
    EnsemblRapid:ENSTABG00005005656
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Thunnus albacares
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Thunnus
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    Genomic context

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    See LOC122991119 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current fThuAlb1.1 (GCF_914725855.1) 10 NC_058115.1 (11920806..11929777)

    Chromosome 10 - NC_058115.1Genomic Context describing neighboring genes Neighboring gene TNFAIP3 interacting protein 1 Neighboring gene annexin A6 Neighboring gene platelet-derived growth factor receptor-like protein Neighboring gene NEDD4 binding protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_058115.1 Chromosome 10 Reference fThuAlb1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables amino acid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in amino acid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cationic amino acid transporter 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Thunnus albacares Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fThuAlb1.1

    Genomic

    1. NC_058115.1 Reference fThuAlb1.1

      Range
      11920806..11929777
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044364756.1 → XP_044220691.1  cationic amino acid transporter 2-like

      Conserved Domains (1) summary
      TIGR00906
      Location:38 → 595
      2A0303; cationic amino acid transport permease

    2. XM_044364757.1 → XP_044220692.1  cationic amino acid transporter 2-like

      Related
      ENSTABP00005013552.1, ENSTABT00005013699.1
      Conserved Domains (1) summary
      TIGR00906
      Location:38 → 595
      2A0303; cationic amino acid transport permease
    Nucleotide Protein
    Heading Accession and Version

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