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    GVI51_K04191 uncharacterized protein [ Nakaseomyces glabratus ]

    Gene ID: 2889993, updated on 6-Dec-2024

    Summary

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    Gene symbol
    GVI51_K04191
    Gene description
    uncharacterized protein
    Locus tag
    GVI51_K04191
    See related
    FungiDB:GVI51_K04191; VEuPathDB:GVI51_K04191
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Nakaseomyces glabratus (strain: ATCC 2001, nat-host: Homo sapiens, culture-collection: ATCC:2001, type-material: type material of Cryptococcus glabratus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces
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    Genomic context

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    See GVI51_K04191 in Genome Data Viewer
    Location:
    chromosome: K
    Exon count:
    1
    Sequence:
    Chromosome: K; NC_088961.1 (410794..412737)

    Chromosome K - NC_088961.1Genomic Context describing neighboring genes Neighboring gene protein kinase FMP48 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene RSC subunit protein RSC1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_088961.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo genome assembly of Candida glabrata reveals cell wall protein complement and structure of dispersed tandem repeat arrays. Xu Z, et al. Mol Microbiol, 2020 Jun. PMID 32068314
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    • CAGL0K04345g
      Ortholog(s) have mRNA binding, translation initiation factor activity, role in translational initiation and cytosolic small ribosomal subunit, ribosome localization

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translational initiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_448414.1
    • CAGL0K04345g
      Ortholog(s) have mRNA binding, translation initiation factor activity, role in translational initiation and cytosolic small ribosomal subunit, ribosome localization

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_088961.1 Reference assembly

      Range
      410794..412737
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_448414.1 → XP_448414.1  uncharacterized protein GVI51_K04191 [Nakaseomyces glabratus]

      See identical proteins and their annotated locations for XP_448414.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0W0CJP8, Q6FMY0
      Conserved Domains (2) summary
      COG5354
      Location:1 → 642
      COG5354; Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
      sd00039
      Location:238 → 290
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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