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    LOC122872450 abl interactor 2-like [ Siniperca chuatsi (mandarin fish) ]

    Gene ID: 122872450, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC122872450
    Gene description
    abl interactor 2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Siniperca chuatsi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Centrarchiformes; Centrarchoidei; Sinipercidae; Siniperca
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    Genomic context

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    See LOC122872450 in Genome Data Viewer
    Location:
    chromosome: LG24
    Exon count:
    12
    Annotation release Status Assembly LG Location
    100 current ASM2008510v1 (GCF_020085105.1) LG24 NC_058065.1 (4669785..4695008, complement)

    Linkage Group LG24 - NC_058065.1Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(XVIII) chain-like Neighboring gene uncharacterized LOC122872452 Neighboring gene cytochrome P450 20A1 Neighboring gene transmembrane protein 237B-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_058065.1 Chromosome LG24 Reference ASM2008510v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SH3 domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lamellipodium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    abl interactor 1-like; abl interactor 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Siniperca chuatsi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2008510v1 Primary Assembly

    Genomic

    1. NC_058065.1 Reference ASM2008510v1 Primary Assembly

      Range
      4669785..4695008 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044188697.1 → XP_044044632.1  abl interactor 2-like isoform X2

      Conserved Domains (2) summary
      cd11972
      Location:495 → 555
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2
      PHA03247
      Location:294 → 431
      PHA03247; large tegument protein UL36; Provisional

    2. XM_044188703.1 → XP_044044638.1  abl interactor 2-like isoform X7

      Conserved Domains (2) summary
      cd11972
      Location:446 → 506
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2
      PHA03247
      Location:245 → 382
      PHA03247; large tegument protein UL36; Provisional

    3. XM_044188718.1 → XP_044044653.1  abl interactor 2-like isoform X21

      Conserved Domains (1) summary
      cd11972
      Location:418 → 478
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2

    4. XM_044188702.1 → XP_044044637.1  abl interactor 2-like isoform X6

      Conserved Domains (2) summary
      cd11972
      Location:447 → 507
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2
      PHA03247
      Location:238 → 383
      PHA03247; large tegument protein UL36; Provisional

    5. XM_044188696.1 → XP_044044631.1  abl interactor 2-like isoform X1

      Conserved Domains (2) summary
      cd11972
      Location:496 → 556
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2
      PHA03247
      Location:295 → 432
      PHA03247; large tegument protein UL36; Provisional

    6. XM_044188705.1 → XP_044044640.1  abl interactor 2-like isoform X9

      Conserved Domains (2) summary
      cd11972
      Location:440 → 500
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2
      PHA03247
      Location:239 → 376
      PHA03247; large tegument protein UL36; Provisional

    7. XM_044188704.1 → XP_044044639.1  abl interactor 2-like isoform X8

      Conserved Domains (2) summary
      cd11972
      Location:441 → 501
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2
      PHA03247
      Location:236 → 377
      PHA03247; large tegument protein UL36; Provisional

    8. XM_044188699.1 → XP_044044634.1  abl interactor 2-like isoform X4

      Conserved Domains (2) summary
      cd11972
      Location:489 → 549
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2
      PHA03247
      Location:288 → 425
      PHA03247; large tegument protein UL36; Provisional

    9. XM_044188701.1 → XP_044044636.1  abl interactor 2-like isoform X5

      Conserved Domains (1) summary
      cd11972
      Location:467 → 527
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2

    10. XM_044188698.1 → XP_044044633.1  abl interactor 2-like isoform X3

      Conserved Domains (2) summary
      cd11972
      Location:490 → 550
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2
      PHA03247
      Location:289 → 426
      PHA03247; large tegument protein UL36; Provisional

    11. XM_044188707.1 → XP_044044642.1  abl interactor 2-like isoform X11

      Conserved Domains (1) summary
      cd11972
      Location:428 → 488
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2

    12. XM_044188714.1 → XP_044044649.1  abl interactor 2-like isoform X18

      Conserved Domains (1) summary
      cd11972
      Location:379 → 439
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2

    13. XM_044188709.1 → XP_044044644.1  abl interactor 2-like isoform X13

      Conserved Domains (1) summary
      cd11972
      Location:422 → 482
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2

    14. XM_044188713.1 → XP_044044648.1  abl interactor 1-like isoform X17

      Conserved Domains (1) summary
      cd11972
      Location:380 → 440
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2

    15. XM_044188710.1 → XP_044044645.1  abl interactor 2-like isoform X14

      Conserved Domains (1) summary
      cd11972
      Location:400 → 460
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2

    16. XM_044188706.1 → XP_044044641.1  abl interactor 2-like isoform X10

      Conserved Domains (1) summary
      cd11972
      Location:429 → 489
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2

    17. XM_044188712.1 → XP_044044647.1  abl interactor 2-like isoform X16

      Conserved Domains (1) summary
      cd11972
      Location:393 → 453
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2

    18. XM_044188708.1 → XP_044044643.1  abl interactor 2-like isoform X12

      Conserved Domains (1) summary
      cd11972
      Location:423 → 483
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2

    19. XM_044188717.1 → XP_044044652.1  abl interactor 2-like isoform X20

      Conserved Domains (1) summary
      cd11972
      Location:345 → 405
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2

    20. XM_044188715.1 → XP_044044650.1  abl interactor 2-like isoform X19

      Conserved Domains (1) summary
      cd11972
      Location:374 → 434
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2

    21. XM_044188711.1 → XP_044044646.1  abl interactor 2-like isoform X15

      Conserved Domains (1) summary
      cd11972
      Location:394 → 454
      SH3_Abi2; Src homology 3 domain of Abl Interactor 2
    Nucleotide Protein
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